Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 SCARNA13-201ENST00000516672 275 ntBASIC3.05□□□□□ -1.92
SRP54P61011 RN7SKP272-201ENST00000516988 232 ntBASIC3.05□□□□□ -1.92
SRP54P61011 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SRP54P61011 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.05□□□□□ -1.92
SRP54P61011 OR7K1P-201ENST00000546439 926 ntBASIC3.05□□□□□ -1.92
SRP54P61011 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.05□□□□□ -1.92
SRP54P61011 H3F3AP1-201ENST00000559984 334 ntBASIC3.05□□□□□ -1.92
SRP54P61011 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.05□□□□□ -1.92
SRP54P61011 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.05□□□□□ -1.92
SRP54P61011 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.05□□□□□ -1.92
SRP54P61011 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.05□□□□□ -1.92
SRP54P61011 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.05□□□□□ -1.92
SRP54P61011 GLUD1P4-201ENST00000590914 418 ntBASIC3.05□□□□□ -1.92
SRP54P61011 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.05□□□□□ -1.92
SRP54P61011 AL391001.1-201ENST00000602747 715 ntBASIC3.05□□□□□ -1.92
SRP54P61011 AL158042.1-201ENST00000605338 460 ntBASIC3.05□□□□□ -1.92
SRP54P61011 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.05□□□□□ -1.92
SRP54P61011 AL391262.2-201ENST00000622466 494 ntBASIC3.05□□□□□ -1.92
SRP54P61011 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.05□□□□□ -1.92
SRP54P61011 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.05□□□□□ -1.92
SRP54P61011 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.05□□□□□ -1.92
SRP54P61011 MTND5P19-201ENST00000424872 1794 ntBASIC3.05□□□□□ -1.92
SRP54P61011 AC092447.7-201ENST00000422212 1621 ntBASIC3.04□□□□□ -1.92
SRP54P61011 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SRP54P61011 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SRP54P61011 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.04□□□□□ -1.92
SRP54P61011 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SRP54P61011 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SRP54P61011 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.04□□□□□ -1.92
SRP54P61011 SNORA4.1-201ENST00000364263 144 ntBASIC3.04□□□□□ -1.92
SRP54P61011 RNU6-777P-201ENST00000364265 104 ntBASIC3.04□□□□□ -1.92
SRP54P61011 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SRP54P61011 SNORA54-201ENST00000384281 123 ntBASIC3.04□□□□□ -1.92
SRP54P61011 SNORA44-201ENST00000384584 132 ntBASIC3.04□□□□□ -1.92
SRP54P61011 SNORD67-201ENST00000390833 111 ntBASIC3.04□□□□□ -1.92
SRP54P61011 U3.26-201ENST00000391236 204 ntBASIC3.04□□□□□ -1.92
SRP54P61011 RPL21P3-201ENST00000395517 478 ntBASIC3.04□□□□□ -1.92
SRP54P61011 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SRP54P61011 RPL7P10-201ENST00000417407 739 ntBASIC3.04□□□□□ -1.92
SRP54P61011 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.04□□□□□ -1.92
SRP54P61011 AL139281.1-201ENST00000422120 335 ntBASIC3.04□□□□□ -1.92
SRP54P61011 COTL1P1-201ENST00000422309 375 ntBASIC3.04□□□□□ -1.92
SRP54P61011 AC013410.2-201ENST00000422627 201 ntBASIC3.04□□□□□ -1.92
SRP54P61011 AC018630.2-202ENST00000422992 927 ntBASIC3.04□□□□□ -1.92
SRP54P61011 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.04□□□□□ -1.92
SRP54P61011 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.04□□□□□ -1.92
SRP54P61011 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.04□□□□□ -1.92
SRP54P61011 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.04□□□□□ -1.92
SRP54P61011 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.04□□□□□ -1.92
SRP54P61011 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.04□□□□□ -1.92
SRP54P61011 MTCO1P27-201ENST00000448269 226 ntBASIC3.04□□□□□ -1.92
SRP54P61011 AL031183.1-201ENST00000457667 207 ntBASIC3.04□□□□□ -1.92
SRP54P61011 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.04□□□□□ -1.92
SRP54P61011 AP001486.1-201ENST00000463339 476 ntBASIC3.04□□□□□ -1.92
SRP54P61011 AL049874.1-201ENST00000489560 388 ntBASIC3.04□□□□□ -1.92
SRP54P61011 AC080014.1-201ENST00000496877 1201 ntBASIC3.04□□□□□ -1.92
SRP54P61011 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SRP54P61011 AC105185.1-201ENST00000518705 535 ntBASIC3.04□□□□□ -1.92
SRP54P61011 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.04□□□□□ -1.92
SRP54P61011 AP000867.2-201ENST00000532468 320 ntBASIC3.04□□□□□ -1.92
SRP54P61011 MTCO2P15-201ENST00000532655 656 ntBASIC3.04□□□□□ -1.92
SRP54P61011 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.04□□□□□ -1.92
SRP54P61011 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.04□□□□□ -1.92
SRP54P61011 DNAJC8P1-201ENST00000554535 372 ntBASIC3.04□□□□□ -1.92
SRP54P61011 EIF4BP1-201ENST00000554881 351 ntBASIC3.04□□□□□ -1.92
SRP54P61011 AC087465.1-201ENST00000560574 245 ntBASIC3.04□□□□□ -1.92
SRP54P61011 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.04□□□□□ -1.92
SRP54P61011 LARP7P3-201ENST00000579888 337 ntBASIC3.04□□□□□ -1.92
SRP54P61011 BNIP3P40-201ENST00000596017 556 ntBASIC3.04□□□□□ -1.92
SRP54P61011 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.04□□□□□ -1.92
SRP54P61011 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.04□□□□□ -1.92
SRP54P61011 AC013553.2-201ENST00000604244 589 ntBASIC3.04□□□□□ -1.92
SRP54P61011 AC093732.2-201ENST00000607950 274 ntBASIC3.04□□□□□ -1.92
SRP54P61011 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.04□□□□□ -1.92
SRP54P61011 AL603758.1-201ENST00000618654 241 ntBASIC3.04□□□□□ -1.92
SRP54P61011 AC079597.1-201ENST00000624306 508 ntBASIC3.04□□□□□ -1.92
SRP54P61011 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SRP54P61011 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SRP54P61011 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SRP54P61011 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SRP54P61011 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SRP54P61011 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
SRP54P61011 MIR22-201ENST00000362190 85 ntBASIC3.03□□□□□ -1.92
SRP54P61011 Y_RNA.111-201ENST00000363248 100 ntBASIC3.03□□□□□ -1.92
SRP54P61011 RNU6-799P-201ENST00000363567 107 ntBASIC3.03□□□□□ -1.92
SRP54P61011 CD24P4-201ENST00000382840 243 ntBASIC3.03□□□□□ -1.92
SRP54P61011 RNU6-114P-201ENST00000384704 105 ntBASIC3.03□□□□□ -1.92
SRP54P61011 AC110754.1-201ENST00000399740 601 ntBASIC3.03□□□□□ -1.92
SRP54P61011 RPL7P25-201ENST00000404151 721 ntBASIC3.03□□□□□ -1.92
SRP54P61011 HMGB1P49-201ENST00000418882 569 ntBASIC3.03□□□□□ -1.92
SRP54P61011 AC006960.1-201ENST00000419980 153 ntBASIC3.03□□□□□ -1.92
SRP54P61011 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.03□□□□□ -1.92
SRP54P61011 AC008850.1-201ENST00000427546 362 ntBASIC3.03□□□□□ -1.92
SRP54P61011 RPL7L1P10-201ENST00000427790 463 ntBASIC3.03□□□□□ -1.92
SRP54P61011 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.03□□□□□ -1.92
SRP54P61011 UBE2V1P13-201ENST00000436983 439 ntBASIC3.03□□□□□ -1.92
SRP54P61011 AL831737.1-201ENST00000441288 271 ntBASIC3.03□□□□□ -1.92
SRP54P61011 FGF7P5-201ENST00000441829 291 ntBASIC3.03□□□□□ -1.92
SRP54P61011 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SRP54P61011 RNU6-420P-201ENST00000458780 107 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms