Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.99□□□□□ -1.77
CLRN1P58418 AP005019.3-201ENST00000620418 560 ntBASIC3.99□□□□□ -1.77
CLRN1P58418 AL353748.2-201ENST00000622148 471 ntBASIC3.99□□□□□ -1.77
CLRN1P58418 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.99□□□□□ -1.77
CLRN1P58418 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.99□□□□□ -1.77
CLRN1P58418 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLRN1P58418 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.99□□□□□ -1.77
CLRN1P58418 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CLRN1P58418 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.99□□□□□ -1.77
CLRN1P58418 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.99□□□□□ -1.77
CLRN1P58418 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CLRN1P58418 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CLRN1P58418 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLRN1P58418 AC087190.4-201ENST00000574616 8334 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 OR51H2P-202ENST00000641424 3046 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLRN1P58418 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
CLRN1P58418 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.98□□□□□ -1.77
CLRN1P58418 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
CLRN1P58418 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CLRN1P58418 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.98□□□□□ -1.77
CLRN1P58418 SNORD113.2-201ENST00000364166 89 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 Y_RNA.326-201ENST00000365176 113 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLRN1P58418 RNU6-1127P-201ENST00000384580 107 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 RNA5SP372-201ENST00000390836 115 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 AL590004.1-201ENST00000405321 300 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 HDGFP1-201ENST00000405943 252 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 RPS20P14-201ENST00000412545 360 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 AF228730.4-201ENST00000421457 183 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.98□□□□□ -1.77
CLRN1P58418 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.98□□□□□ -1.77
CLRN1P58418 MTCYBP6-201ENST00000441810 138 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 NEFMP1-201ENST00000443423 1006 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.98□□□□□ -1.77
CLRN1P58418 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.98□□□□□ -1.77
CLRN1P58418 Y_RNA.689-201ENST00000516589 107 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 SNORA31.22-201ENST00000517204 135 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 AC090136.1-201ENST00000520009 240 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 AC090151.1-201ENST00000520784 730 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 AP003072.1-201ENST00000531740 145 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 AP000889.2-201ENST00000532684 490 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.98□□□□□ -1.77
CLRN1P58418 DYNLL1P4-201ENST00000549314 266 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 HMGB3P26-201ENST00000560051 582 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 FRG2DP-202ENST00000566967 323 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 RN7SL690P-201ENST00000582087 240 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.98□□□□□ -1.77
CLRN1P58418 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.98□□□□□ -1.77
CLRN1P58418 AC006116.10-201ENST00000591836 581 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 AL138889.2-201ENST00000603883 242 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.98□□□□□ -1.77
CLRN1P58418 AC020634.1-201ENST00000608701 549 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 Y_RNA.812-201ENST00000610788 101 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 Y_RNA.784-201ENST00000613803 101 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 SDR42E1P2-201ENST00000614861 481 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLRN1P58418 Y_RNA.787-201ENST00000616522 101 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 Y_RNA.780-201ENST00000617336 101 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLRN1P58418 Y_RNA.801-201ENST00000619005 101 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.98□□□□□ -1.77
CLRN1P58418 BMS1P21-201ENST00000634565 365 ntBASIC3.98□□□□□ -1.77
CLRN1P58418 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.98□□□□□ -1.77
CLRN1P58418 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
CLRN1P58418 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
CLRN1P58418 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.97□□□□□ -1.77
CLRN1P58418 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLRN1P58418 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLRN1P58418 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.97□□□□□ -1.77
CLRN1P58418 SNORD113-7-201ENST00000363762 77 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 Y_RNA.259-201ENST00000364619 101 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 RNA5SP151-201ENST00000365632 117 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 RNU6-76P-201ENST00000384060 104 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLRN1P58418 RNA5SP111-201ENST00000411386 101 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.97□□□□□ -1.77
CLRN1P58418 AC092809.3-201ENST00000415453 231 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.97□□□□□ -1.77
CLRN1P58418 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.97□□□□□ -1.77
CLRN1P58418 NDUFA5P4-201ENST00000436704 385 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.97□□□□□ -1.77
CLRN1P58418 AL359073.1-201ENST00000448036 403 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 AC073264.2-201ENST00000448886 166 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.97□□□□□ -1.77
CLRN1P58418 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
CLRN1P58418 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.97□□□□□ -1.77
CLRN1P58418 DEFB109F-201ENST00000491870 277 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.97□□□□□ -1.77
CLRN1P58418 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.97□□□□□ -1.77
CLRN1P58418 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.97□□□□□ -1.77
CLRN1P58418 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.97□□□□□ -1.77
CLRN1P58418 RNU6-559P-201ENST00000516151 98 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 RNU6-840P-201ENST00000517275 65 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.97□□□□□ -1.77
CLRN1P58418 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.97□□□□□ -1.77
CLRN1P58418 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.97□□□□□ -1.77
CLRN1P58418 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.97□□□□□ -1.77
CLRN1P58418 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.97□□□□□ -1.77
CLRN1P58418 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms