Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 MIR5092-201ENST00000583139 88 ntBASIC2.66□□□□□ -1.98
CDH6P55285 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH6P55285 AL035413.2-201ENST00000604801 525 ntBASIC2.66□□□□□ -1.98
CDH6P55285 BNIP3P19-201ENST00000605397 577 ntBASIC2.66□□□□□ -1.98
CDH6P55285 OR2AS2P-201ENST00000606902 342 ntBASIC2.66□□□□□ -1.98
CDH6P55285 AL450472.3-201ENST00000615578 367 ntBASIC2.66□□□□□ -1.98
CDH6P55285 AC090132.2-201ENST00000615881 347 ntBASIC2.66□□□□□ -1.98
CDH6P55285 AP003485.1-201ENST00000625093 753 ntBASIC2.66□□□□□ -1.98
CDH6P55285 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH6P55285 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.66□□□□□ -1.98
CDH6P55285 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH6P55285 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDH6P55285 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CDH6P55285 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CDH6P55285 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.65□□□□□ -1.98
CDH6P55285 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CDH6P55285 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CDH6P55285 AC062016.1-201ENST00000355719 319 ntBASIC2.65□□□□□ -1.99
CDH6P55285 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CDH6P55285 RNA5SP184-201ENST00000411071 108 ntBASIC2.65□□□□□ -1.99
CDH6P55285 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.65□□□□□ -1.99
CDH6P55285 OR4K6P-201ENST00000416478 897 ntBASIC2.65□□□□□ -1.99
CDH6P55285 AC007435.1-201ENST00000421086 415 ntBASIC2.65□□□□□ -1.99
CDH6P55285 MTCO2P5-201ENST00000422621 426 ntBASIC2.65□□□□□ -1.99
CDH6P55285 ARL5AP4-201ENST00000430731 512 ntBASIC2.65□□□□□ -1.99
CDH6P55285 ARPC3P1-201ENST00000437218 533 ntBASIC2.65□□□□□ -1.99
CDH6P55285 MTND2P20-201ENST00000440805 661 ntBASIC2.65□□□□□ -1.99
CDH6P55285 AP000852.1-201ENST00000472460 573 ntBASIC2.65□□□□□ -1.99
CDH6P55285 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.65□□□□□ -1.99
CDH6P55285 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.65□□□□□ -1.99
CDH6P55285 RNU6-1028P-201ENST00000517164 93 ntBASIC2.65□□□□□ -1.99
CDH6P55285 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.65□□□□□ -1.99
CDH6P55285 MTCO1P47-201ENST00000523889 1271 ntBASIC2.65□□□□□ -1.99
CDH6P55285 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.65□□□□□ -1.99
CDH6P55285 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.65□□□□□ -1.99
CDH6P55285 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CDH6P55285 HIGD1AP17-201ENST00000554576 276 ntBASIC2.65□□□□□ -1.99
CDH6P55285 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.65□□□□□ -1.99
CDH6P55285 MIR4319-201ENST00000577285 85 ntBASIC2.65□□□□□ -1.99
CDH6P55285 MIR3912-201ENST00000577566 105 ntBASIC2.65□□□□□ -1.99
CDH6P55285 AC011471.1-201ENST00000585766 187 ntBASIC2.65□□□□□ -1.99
CDH6P55285 RPL12P50-201ENST00000603116 116 ntBASIC2.65□□□□□ -1.99
CDH6P55285 AC124016.2-201ENST00000610058 665 ntBASIC2.65□□□□□ -1.99
CDH6P55285 AC243773.3-201ENST00000613270 256 ntBASIC2.65□□□□□ -1.99
CDH6P55285 AC103798.2-201ENST00000624292 632 ntBASIC2.65□□□□□ -1.99
CDH6P55285 AC092608.2-201ENST00000624427 218 ntBASIC2.65□□□□□ -1.99
CDH6P55285 OR5H6-203ENST00000642105 978 ntBASIC2.65□□□□□ -1.99
CDH6P55285 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.65□□□□□ -1.99
CDH6P55285 AL365361.1-201ENST00000566942 3481 ntBASIC2.65□□□□□ -1.99
CDH6P55285 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.65□□□□□ -1.99
CDH6P55285 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
CDH6P55285 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CDH6P55285 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CDH6P55285 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CDH6P55285 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CDH6P55285 SNORA5B-201ENST00000363786 132 ntBASIC2.64□□□□□ -1.99
CDH6P55285 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.64□□□□□ -1.99
CDH6P55285 MIR34A-201ENST00000385130 110 ntBASIC2.64□□□□□ -1.99
CDH6P55285 DHFRP6-201ENST00000401776 268 ntBASIC2.64□□□□□ -1.99
CDH6P55285 AC080125.1-201ENST00000414888 684 ntBASIC2.64□□□□□ -1.99
CDH6P55285 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.64□□□□□ -1.99
CDH6P55285 USP9YP21-201ENST00000420603 432 ntBASIC2.64□□□□□ -1.99
CDH6P55285 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.64□□□□□ -1.99
CDH6P55285 AC008571.1-201ENST00000467232 300 ntBASIC2.64□□□□□ -1.99
CDH6P55285 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.64□□□□□ -1.99
CDH6P55285 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.64□□□□□ -1.99
CDH6P55285 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.64□□□□□ -1.99
CDH6P55285 TBCAP3-201ENST00000512475 312 ntBASIC2.64□□□□□ -1.99
CDH6P55285 MTND5P4-201ENST00000514978 288 ntBASIC2.64□□□□□ -1.99
CDH6P55285 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.64□□□□□ -1.99
CDH6P55285 AC092451.2-201ENST00000538746 658 ntBASIC2.64□□□□□ -1.99
CDH6P55285 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.64□□□□□ -1.99
CDH6P55285 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.64□□□□□ -1.99
CDH6P55285 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.64□□□□□ -1.99
CDH6P55285 AC126365.2-201ENST00000580630 379 ntBASIC2.64□□□□□ -1.99
CDH6P55285 AL137843.1-201ENST00000605078 385 ntBASIC2.64□□□□□ -1.99
CDH6P55285 AC069304.2-201ENST00000605154 435 ntBASIC2.64□□□□□ -1.99
CDH6P55285 AC004852.3-201ENST00000614131 326 ntBASIC2.64□□□□□ -1.99
CDH6P55285 AC079597.1-201ENST00000624306 508 ntBASIC2.64□□□□□ -1.99
CDH6P55285 AC079228.1-201ENST00000624774 1049 ntBASIC2.64□□□□□ -1.99
CDH6P55285 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
CDH6P55285 SDAD1P2-201ENST00000441308 2028 ntBASIC2.64□□□□□ -1.99
CDH6P55285 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CDH6P55285 RNU1-105P-201ENST00000363470 161 ntBASIC2.63□□□□□ -1.99
CDH6P55285 RNU6-270P-201ENST00000364131 105 ntBASIC2.63□□□□□ -1.99
CDH6P55285 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CDH6P55285 RNU6-1035P-201ENST00000384477 107 ntBASIC2.63□□□□□ -1.99
CDH6P55285 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CDH6P55285 AL139039.1-201ENST00000401900 692 ntBASIC2.63□□□□□ -1.99
CDH6P55285 HMGB1P17-201ENST00000403495 628 ntBASIC2.63□□□□□ -1.99
CDH6P55285 SPA17P1-201ENST00000416656 452 ntBASIC2.63□□□□□ -1.99
CDH6P55285 NUP35P1-201ENST00000422734 947 ntBASIC2.63□□□□□ -1.99
CDH6P55285 AL365496.1-201ENST00000426885 215 ntBASIC2.63□□□□□ -1.99
CDH6P55285 MTCYBP45-201ENST00000435243 565 ntBASIC2.63□□□□□ -1.99
CDH6P55285 RNF2P1-201ENST00000442955 1010 ntBASIC2.63□□□□□ -1.99
CDH6P55285 TRGVB-201ENST00000453257 471 ntBASIC2.63□□□□□ -1.99
CDH6P55285 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.63□□□□□ -1.99
CDH6P55285 AC004924.1-201ENST00000480160 781 ntBASIC2.63□□□□□ -1.99
CDH6P55285 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.63□□□□□ -1.99
CDH6P55285 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms