Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 Z75741.2-201ENST00000417272 1167 ntBASIC1.86□□□□□ -2.11
CLTCL1P53675 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC1.86□□□□□ -2.11
CLTCL1P53675 LSM1P1-201ENST00000438629 273 ntBASIC1.86□□□□□ -2.11
CLTCL1P53675 AL121871.1-201ENST00000443413 436 ntBASIC1.86□□□□□ -2.11
CLTCL1P53675 HMGN2P18-201ENST00000450680 270 ntBASIC1.86□□□□□ -2.11
CLTCL1P53675 AC022431.1-201ENST00000450941 438 ntBASIC1.86□□□□□ -2.11
CLTCL1P53675 RPPH1-2P-201ENST00000516688 293 ntBASIC1.86□□□□□ -2.11
CLTCL1P53675 MIR514B-201ENST00000516774 80 ntBASIC1.86□□□□□ -2.11
CLTCL1P53675 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.86□□□□□ -2.11
CLTCL1P53675 AC011604.1-201ENST00000545978 196 ntBASIC1.86□□□□□ -2.11
CLTCL1P53675 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.86□□□□□ -2.11
CLTCL1P53675 HSPE1P1-201ENST00000421494 318 ntBASIC1.85□□□□□ -2.11
CLTCL1P53675 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.85□□□□□ -2.11
CLTCL1P53675 AF131216.2-201ENST00000512316 564 ntBASIC1.85□□□□□ -2.11
CLTCL1P53675 CBX3P2-202ENST00000583365 535 ntBASIC1.85□□□□□ -2.11
CLTCL1P53675 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
CLTCL1P53675 AP000648.3-201ENST00000623539 4507 ntBASIC1.85□□□□□ -2.11
CLTCL1P53675 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.85□□□□□ -2.11
CLTCL1P53675 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
CLTCL1P53675 RNU2-25P-201ENST00000411041 191 ntBASIC1.84□□□□□ -2.11
CLTCL1P53675 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC1.84□□□□□ -2.11
CLTCL1P53675 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.84□□□□□ -2.11
CLTCL1P53675 HMGB3P30-201ENST00000457863 606 ntBASIC1.84□□□□□ -2.11
CLTCL1P53675 COX6CP14-201ENST00000469580 174 ntBASIC1.84□□□□□ -2.11
CLTCL1P53675 RBM43P1-201ENST00000476891 1081 ntBASIC1.84□□□□□ -2.11
CLTCL1P53675 AC008526.1-201ENST00000509149 338 ntBASIC1.84□□□□□ -2.11
CLTCL1P53675 HMGB3P3-201ENST00000510526 400 ntBASIC1.84□□□□□ -2.11
CLTCL1P53675 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.84□□□□□ -2.11
CLTCL1P53675 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.84□□□□□ -2.11
CLTCL1P53675 AC136443.5-201ENST00000603741 370 ntBASIC1.84□□□□□ -2.11
CLTCL1P53675 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
CLTCL1P53675 U3.15-201ENST00000365398 212 ntBASIC1.84□□□□□ -2.12
CLTCL1P53675 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.84□□□□□ -2.12
CLTCL1P53675 MTND5P25-201ENST00000430499 799 ntBASIC1.84□□□□□ -2.12
CLTCL1P53675 AC006390.1-201ENST00000508068 283 ntBASIC1.84□□□□□ -2.12
CLTCL1P53675 RNU6-1223P-201ENST00000517124 104 ntBASIC1.84□□□□□ -2.12
CLTCL1P53675 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.84□□□□□ -2.12
CLTCL1P53675 MIR151B-201ENST00000584249 96 ntBASIC1.84□□□□□ -2.12
CLTCL1P53675 AC006023.2-201ENST00000609916 167 ntBASIC1.84□□□□□ -2.12
CLTCL1P53675 AP000560.1-201ENST00000624150 1937 ntBASIC1.83□□□□□ -2.12
CLTCL1P53675 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.83□□□□□ -2.12
CLTCL1P53675 AP002907.1-201ENST00000606361 1430 ntBASIC1.83□□□□□ -2.12
CLTCL1P53675 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.83□□□□□ -2.12
CLTCL1P53675 RNU6-203P-201ENST00000384038 104 ntBASIC1.83□□□□□ -2.12
CLTCL1P53675 RNU6-342P-201ENST00000384521 104 ntBASIC1.83□□□□□ -2.12
CLTCL1P53675 RPL7P27-201ENST00000403775 720 ntBASIC1.83□□□□□ -2.12
CLTCL1P53675 UBE2FP3-201ENST00000436366 524 ntBASIC1.83□□□□□ -2.12
CLTCL1P53675 ATG12P2-201ENST00000456830 416 ntBASIC1.83□□□□□ -2.12
CLTCL1P53675 MRPL42P6-201ENST00000486397 371 ntBASIC1.83□□□□□ -2.12
CLTCL1P53675 RN7SKP49-201ENST00000516675 260 ntBASIC1.83□□□□□ -2.12
CLTCL1P53675 RNU2-44P-201ENST00000516795 194 ntBASIC1.83□□□□□ -2.12
CLTCL1P53675 RNU1-104P-201ENST00000517280 175 ntBASIC1.83□□□□□ -2.12
CLTCL1P53675 AC008962.1-201ENST00000605729 304 ntBASIC1.83□□□□□ -2.12
CLTCL1P53675 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
CLTCL1P53675 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CLTCL1P53675 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CLTCL1P53675 TRAPPC2P10-201ENST00000415662 323 ntBASIC1.82□□□□□ -2.12
CLTCL1P53675 IPO7P1-201ENST00000442031 636 ntBASIC1.82□□□□□ -2.12
CLTCL1P53675 AC104685.1-201ENST00000502445 371 ntBASIC1.82□□□□□ -2.12
CLTCL1P53675 HAUS1P1-201ENST00000505275 832 ntBASIC1.82□□□□□ -2.12
CLTCL1P53675 AC090821.2-201ENST00000523552 176 ntBASIC1.82□□□□□ -2.12
CLTCL1P53675 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.82□□□□□ -2.12
CLTCL1P53675 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.82□□□□□ -2.12
CLTCL1P53675 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.82□□□□□ -2.12
CLTCL1P53675 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC1.82□□□□□ -2.12
CLTCL1P53675 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.81□□□□□ -2.12
CLTCL1P53675 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.81□□□□□ -2.12
CLTCL1P53675 AC007395.1-201ENST00000451333 677 ntBASIC1.81□□□□□ -2.12
CLTCL1P53675 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.81□□□□□ -2.12
CLTCL1P53675 AC107398.1-201ENST00000486904 505 ntBASIC1.81□□□□□ -2.12
CLTCL1P53675 AC113155.1-201ENST00000511141 769 ntBASIC1.81□□□□□ -2.12
CLTCL1P53675 IGKV2D-36-201ENST00000518643 226 ntBASIC1.81□□□□□ -2.12
CLTCL1P53675 AP005660.1-201ENST00000522972 293 ntBASIC1.81□□□□□ -2.12
CLTCL1P53675 AC006270.2-201ENST00000578523 652 ntBASIC1.81□□□□□ -2.12
CLTCL1P53675 AL031601.2-202ENST00000622650 282 ntBASIC1.81□□□□□ -2.12
CLTCL1P53675 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.81□□□□□ -2.12
CLTCL1P53675 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CLTCL1P53675 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CLTCL1P53675 RNU6-1080P-201ENST00000383982 107 ntBASIC1.8□□□□□ -2.12
CLTCL1P53675 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC1.8□□□□□ -2.12
CLTCL1P53675 KATNBL1P3-201ENST00000443475 909 ntBASIC1.8□□□□□ -2.12
CLTCL1P53675 RPL21P134-201ENST00000453468 483 ntBASIC1.8□□□□□ -2.12
CLTCL1P53675 RPS27P21-201ENST00000486977 252 ntBASIC1.8□□□□□ -2.12
CLTCL1P53675 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.8□□□□□ -2.12
CLTCL1P53675 SETP7-201ENST00000552169 453 ntBASIC1.8□□□□□ -2.12
CLTCL1P53675 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CLTCL1P53675 MTND5P12-201ENST00000502851 1449 ntBASIC1.8□□□□□ -2.12
CLTCL1P53675 MTND4P27-201ENST00000450813 1354 ntBASIC1.8□□□□□ -2.12
CLTCL1P53675 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CLTCL1P53675 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CLTCL1P53675 RPS3AP44-201ENST00000425466 790 ntBASIC1.8□□□□□ -2.12
CLTCL1P53675 CALM1P1-201ENST00000442082 433 ntBASIC1.8□□□□□ -2.12
CLTCL1P53675 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.8□□□□□ -2.12
CLTCL1P53675 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.8□□□□□ -2.12
CLTCL1P53675 AC007098.1-201ENST00000420122 367 ntBASIC1.79□□□□□ -2.12
CLTCL1P53675 PGBD4P6-201ENST00000421501 610 ntBASIC1.79□□□□□ -2.12
CLTCL1P53675 AC008885.2-201ENST00000509506 930 ntBASIC1.79□□□□□ -2.12
CLTCL1P53675 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.79□□□□□ -2.12
CLTCL1P53675 AL731537.2-201ENST00000561565 951 ntBASIC1.79□□□□□ -2.12
CLTCL1P53675 MTCO1P40-201ENST00000574371 625 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms