Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.41□□□□□ -1.86
LIMK1P53667 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.41□□□□□ -1.86
LIMK1P53667 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 AL353678.1-201ENST00000422735 741 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.41□□□□□ -1.86
LIMK1P53667 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.41□□□□□ -1.86
LIMK1P53667 AC098826.2-201ENST00000452011 651 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 AC099563.1-201ENST00000456086 418 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 RNU7-125P-201ENST00000458760 62 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 AC023598.1-201ENST00000472521 361 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 RPS3AP50-201ENST00000487064 803 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 RPS3AP22-201ENST00000488297 769 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 AC022447.3-201ENST00000506865 495 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 FCF1P8-201ENST00000510322 597 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.41□□□□□ -1.86
LIMK1P53667 RNU6-1129P-201ENST00000515964 104 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 HMGN1P28-201ENST00000521340 364 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 AP006245.1-201ENST00000522549 120 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.41□□□□□ -1.86
LIMK1P53667 AC011602.1-201ENST00000546484 331 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.41□□□□□ -1.86
LIMK1P53667 AC125611.2-201ENST00000551907 647 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 SETP2-201ENST00000553886 926 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 AC145350.1-201ENST00000567426 208 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.41□□□□□ -1.86
LIMK1P53667 AC018638.7-201ENST00000605836 1114 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 AC013412.1-201ENST00000610687 192 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 AL450472.3-201ENST00000615578 367 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.41□□□□□ -1.86
LIMK1P53667 PCMTD1P7-201ENST00000634506 357 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.41□□□□□ -1.86
LIMK1P53667 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
LIMK1P53667 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LIMK1P53667 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
LIMK1P53667 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
LIMK1P53667 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
LIMK1P53667 RNU6-660P-201ENST00000364566 109 ntBASIC3.4□□□□□ -1.87
LIMK1P53667 AP002088.1-201ENST00000382740 395 ntBASIC3.4□□□□□ -1.87
LIMK1P53667 Y_RNA.548-201ENST00000384656 105 ntBASIC3.4□□□□□ -1.87
LIMK1P53667 MIR493-201ENST00000385254 89 ntBASIC3.4□□□□□ -1.87
LIMK1P53667 AL138885.1-201ENST00000405921 675 ntBASIC3.4□□□□□ -1.87
LIMK1P53667 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.4□□□□□ -1.87
LIMK1P53667 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.4□□□□□ -1.87
LIMK1P53667 ATG3P1-201ENST00000419507 911 ntBASIC3.4□□□□□ -1.87
LIMK1P53667 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.4□□□□□ -1.87
LIMK1P53667 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.4□□□□□ -1.87
LIMK1P53667 AC108734.1-201ENST00000439549 399 ntBASIC3.4□□□□□ -1.87
LIMK1P53667 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.4□□□□□ -1.87
LIMK1P53667 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.4□□□□□ -1.87
LIMK1P53667 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.4□□□□□ -1.87
LIMK1P53667 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.4□□□□□ -1.87
LIMK1P53667 OR6K1P-201ENST00000456766 971 ntBASIC3.4□□□□□ -1.87
LIMK1P53667 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.4□□□□□ -1.87
LIMK1P53667 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.4□□□□□ -1.87
LIMK1P53667 AC010401.1-201ENST00000463867 348 ntBASIC3.4□□□□□ -1.87
LIMK1P53667 AC004924.1-201ENST00000480160 781 ntBASIC3.4□□□□□ -1.87
LIMK1P53667 AC108860.1-201ENST00000484521 383 ntBASIC3.4□□□□□ -1.87
LIMK1P53667 FCF1P3-201ENST00000496394 590 ntBASIC3.4□□□□□ -1.87
LIMK1P53667 KCTD9P5-201ENST00000504141 1170 ntBASIC3.4□□□□□ -1.87
LIMK1P53667 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LIMK1P53667 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LIMK1P53667 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LIMK1P53667 AC022483.1-201ENST00000514020 567 ntBASIC3.4□□□□□ -1.87
LIMK1P53667 RN7SKP282-201ENST00000516824 299 ntBASIC3.4□□□□□ -1.87
LIMK1P53667 FAM60DP-201ENST00000524174 632 ntBASIC3.4□□□□□ -1.87
LIMK1P53667 MTATP6P15-201ENST00000527233 835 ntBASIC3.4□□□□□ -1.87
LIMK1P53667 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.4□□□□□ -1.87
LIMK1P53667 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.4□□□□□ -1.87
LIMK1P53667 AC005832.2-201ENST00000538921 1430 ntBASIC3.4□□□□□ -1.87
LIMK1P53667 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.4□□□□□ -1.87
LIMK1P53667 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
LIMK1P53667 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.4□□□□□ -1.87
LIMK1P53667 AL157394.1-201ENST00000562983 1224 ntBASIC3.4□□□□□ -1.87
LIMK1P53667 AC055876.1-202ENST00000567053 138 ntBASIC3.4□□□□□ -1.87
LIMK1P53667 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LIMK1P53667 MIR544B-201ENST00000582372 78 ntBASIC3.4□□□□□ -1.87
LIMK1P53667 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
LIMK1P53667 KLKP1-201ENST00000595979 403 ntBASIC3.4□□□□□ -1.87
LIMK1P53667 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.4□□□□□ -1.87
LIMK1P53667 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.4□□□□□ -1.87
LIMK1P53667 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
LIMK1P53667 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
LIMK1P53667 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LIMK1P53667 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
LIMK1P53667 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
LIMK1P53667 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.39□□□□□ -1.87
LIMK1P53667 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
LIMK1P53667 SNORA44-201ENST00000384584 132 ntBASIC3.39□□□□□ -1.87
LIMK1P53667 U3.20-201ENST00000390909 217 ntBASIC3.39□□□□□ -1.87
LIMK1P53667 RNU6-516P-201ENST00000411381 104 ntBASIC3.39□□□□□ -1.87
LIMK1P53667 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.39□□□□□ -1.87
LIMK1P53667 RPL31P12-201ENST00000422587 358 ntBASIC3.39□□□□□ -1.87
LIMK1P53667 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.39□□□□□ -1.87
LIMK1P53667 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.39□□□□□ -1.87
LIMK1P53667 AC068587.2-201ENST00000478386 781 ntBASIC3.39□□□□□ -1.87
LIMK1P53667 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.39□□□□□ -1.87
LIMK1P53667 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.39□□□□□ -1.87
LIMK1P53667 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.39□□□□□ -1.87
LIMK1P53667 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms