Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AL079343.1-201ENST00000572358 1771 ntBASIC3.07□□□□□ -1.92
BRCC3P46736 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
BRCC3P46736 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
BRCC3P46736 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.07□□□□□ -1.92
BRCC3P46736 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.06□□□□□ -1.92
BRCC3P46736 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.06□□□□□ -1.92
BRCC3P46736 RNA5SP295-201ENST00000362655 121 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 RNU6-1155P-201ENST00000363554 107 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 Y_RNA.169-201ENST00000363745 96 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 DYNLT3P1-201ENST00000378574 347 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 UBE2V1P2-201ENST00000397758 440 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 AL590084.2-201ENST00000401481 382 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 AL354719.1-201ENST00000406535 843 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
BRCC3P46736 RNU4-65P-201ENST00000410473 140 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 TPMTP2-201ENST00000414372 726 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.06□□□□□ -1.92
BRCC3P46736 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 AC007742.1-201ENST00000425789 329 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.06□□□□□ -1.92
BRCC3P46736 MTCYBP45-201ENST00000435243 565 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 ELOCP26-201ENST00000436067 329 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 AL354941.1-201ENST00000438600 464 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 ARPC3P5-201ENST00000448802 534 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 AC108938.1-201ENST00000451204 136 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 RNU7-125P-201ENST00000458760 62 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 RPL31P50-201ENST00000471002 296 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 RPS3AP22-201ENST00000488297 769 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 AP001025.2-201ENST00000490908 477 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
BRCC3P46736 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.06□□□□□ -1.92
BRCC3P46736 COX7A2P2-201ENST00000505291 250 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 AC105914.1-201ENST00000511798 226 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 MRPS33P3-201ENST00000513456 322 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.06□□□□□ -1.92
BRCC3P46736 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.06□□□□□ -1.92
BRCC3P46736 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.06□□□□□ -1.92
BRCC3P46736 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.06□□□□□ -1.92
BRCC3P46736 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.06□□□□□ -1.92
BRCC3P46736 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.06□□□□□ -1.92
BRCC3P46736 AC135628.1-201ENST00000568867 534 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 HMGB1P6-201ENST00000569046 646 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 MIR4319-201ENST00000577285 85 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 MIR4672-201ENST00000583126 81 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.06□□□□□ -1.92
BRCC3P46736 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
BRCC3P46736 AC025811.1-201ENST00000604312 472 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 AC004832.5-201ENST00000608677 401 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 AC079228.1-201ENST00000624774 1049 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 AC007671.2-201ENST00000637344 619 ntBASIC3.06□□□□□ -1.92
BRCC3P46736 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
BRCC3P46736 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
BRCC3P46736 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
BRCC3P46736 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.05□□□□□ -1.92
BRCC3P46736 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.05□□□□□ -1.92
BRCC3P46736 AL079305.1-201ENST00000623159 3008 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
BRCC3P46736 OR4G11P-202ENST00000642116 1414 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
BRCC3P46736 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
BRCC3P46736 DEFB109C-201ENST00000382575 264 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 DEFB109B-201ENST00000382656 264 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 AL031121.1-201ENST00000406553 254 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.05□□□□□ -1.92
BRCC3P46736 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.05□□□□□ -1.92
BRCC3P46736 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.05□□□□□ -1.92
BRCC3P46736 USP9YP26-201ENST00000421008 661 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.05□□□□□ -1.92
BRCC3P46736 AL022400.1-201ENST00000423946 935 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 USP9YP36-201ENST00000424581 829 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 AL590233.1-201ENST00000430017 456 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 MTND5P25-201ENST00000430499 799 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 AL445567.1-201ENST00000439121 144 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 AC112653.1-201ENST00000443851 386 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.05□□□□□ -1.92
BRCC3P46736 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.05□□□□□ -1.92
BRCC3P46736 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.05□□□□□ -1.92
BRCC3P46736 Z82190.1-201ENST00000454534 490 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.05□□□□□ -1.92
BRCC3P46736 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.05□□□□□ -1.92
BRCC3P46736 AC004062.1-201ENST00000509926 645 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 MTCYBP43-201ENST00000513621 740 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 AC093677.1-201ENST00000514414 678 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 RNU1-61P-201ENST00000516107 151 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 SNORA31.8-201ENST00000516327 108 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 AC245166.1-201ENST00000521012 253 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 FAM60DP-201ENST00000524174 632 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
BRCC3P46736 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.05□□□□□ -1.92
BRCC3P46736 OR7K1P-201ENST00000546439 926 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 AC008015.1-201ENST00000555505 465 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.05□□□□□ -1.92
BRCC3P46736 AC011260.1-201ENST00000578420 472 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 AC138761.3-201ENST00000579993 334 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
BRCC3P46736 AP001029.3-201ENST00000588063 596 ntBASIC3.05□□□□□ -1.92
BRCC3P46736 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.05□□□□□ -1.92
BRCC3P46736 AL596245.1-201ENST00000618994 362 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms