Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.58□□□□□ -2
SLC1A1P43005 RPL7P44-201ENST00000424827 742 ntBASIC2.58□□□□□ -2
SLC1A1P43005 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.58□□□□□ -2
SLC1A1P43005 AC104389.3-201ENST00000445629 235 ntBASIC2.58□□□□□ -2
SLC1A1P43005 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.58□□□□□ -2
SLC1A1P43005 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.58□□□□□ -2
SLC1A1P43005 TRGVB-201ENST00000453257 471 ntBASIC2.58□□□□□ -2
SLC1A1P43005 RPL30P5-201ENST00000494923 336 ntBASIC2.58□□□□□ -2
SLC1A1P43005 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.58□□□□□ -2
SLC1A1P43005 RN7SKP24-201ENST00000515888 284 ntBASIC2.58□□□□□ -2
SLC1A1P43005 RPPH1-2P-201ENST00000516688 293 ntBASIC2.58□□□□□ -2
SLC1A1P43005 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.58□□□□□ -2
SLC1A1P43005 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SLC1A1P43005 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.58□□□□□ -2
SLC1A1P43005 GTF3AP2-201ENST00000557014 266 ntBASIC2.58□□□□□ -2
SLC1A1P43005 MIR3912-201ENST00000577566 105 ntBASIC2.58□□□□□ -2
SLC1A1P43005 MIR5194-201ENST00000582634 120 ntBASIC2.58□□□□□ -2
SLC1A1P43005 RPL23AP78-201ENST00000599928 470 ntBASIC2.58□□□□□ -2
SLC1A1P43005 AC068620.3-201ENST00000602749 560 ntBASIC2.58□□□□□ -2
SLC1A1P43005 AC079089.3-201ENST00000603094 673 ntBASIC2.58□□□□□ -2
SLC1A1P43005 AC243773.3-201ENST00000613270 256 ntBASIC2.58□□□□□ -2
SLC1A1P43005 AL450472.3-201ENST00000615578 367 ntBASIC2.58□□□□□ -2
SLC1A1P43005 AP003485.1-201ENST00000625093 753 ntBASIC2.58□□□□□ -2
SLC1A1P43005 AC126544.2-201ENST00000625174 749 ntBASIC2.58□□□□□ -2
SLC1A1P43005 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.58□□□□□ -2
SLC1A1P43005 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.58□□□□□ -2
SLC1A1P43005 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.57□□□□□ -2
SLC1A1P43005 RNU5A-1-201ENST00000362698 116 ntBASIC2.57□□□□□ -2
SLC1A1P43005 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.57□□□□□ -2
SLC1A1P43005 MIR34A-201ENST00000385130 110 ntBASIC2.57□□□□□ -2
SLC1A1P43005 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.57□□□□□ -2
SLC1A1P43005 RNU2-52P-201ENST00000410680 190 ntBASIC2.57□□□□□ -2
SLC1A1P43005 CCDC58P2-201ENST00000417131 366 ntBASIC2.57□□□□□ -2
SLC1A1P43005 AC007435.1-201ENST00000421086 415 ntBASIC2.57□□□□□ -2
SLC1A1P43005 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.57□□□□□ -2
SLC1A1P43005 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.57□□□□□ -2
SLC1A1P43005 ARL5AP4-201ENST00000430731 512 ntBASIC2.57□□□□□ -2
SLC1A1P43005 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.57□□□□□ -2
SLC1A1P43005 RPL23AP45-201ENST00000476406 468 ntBASIC2.57□□□□□ -2
SLC1A1P43005 AC008427.1-201ENST00000503102 655 ntBASIC2.57□□□□□ -2
SLC1A1P43005 AC016550.1-201ENST00000505348 785 ntBASIC2.57□□□□□ -2
SLC1A1P43005 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.57□□□□□ -2
SLC1A1P43005 RNU6-1225P-201ENST00000516336 65 ntBASIC2.57□□□□□ -2
SLC1A1P43005 RN7SKP31-201ENST00000516354 278 ntBASIC2.57□□□□□ -2
SLC1A1P43005 SNORA31.11-201ENST00000516528 139 ntBASIC2.57□□□□□ -2
SLC1A1P43005 RNU6-467P-201ENST00000517027 110 ntBASIC2.57□□□□□ -2
SLC1A1P43005 AC103783.1-201ENST00000520506 373 ntBASIC2.57□□□□□ -2
SLC1A1P43005 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.57□□□□□ -2
SLC1A1P43005 AC087373.1-201ENST00000524920 491 ntBASIC2.57□□□□□ -2
SLC1A1P43005 SLC2A13P1-201ENST00000531560 322 ntBASIC2.57□□□□□ -2
SLC1A1P43005 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.57□□□□□ -2
SLC1A1P43005 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.57□□□□□ -2
SLC1A1P43005 HIGD1AP17-201ENST00000554576 276 ntBASIC2.57□□□□□ -2
SLC1A1P43005 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.57□□□□□ -2
SLC1A1P43005 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.57□□□□□ -2
SLC1A1P43005 ACTR3BP3-201ENST00000565577 979 ntBASIC2.57□□□□□ -2
SLC1A1P43005 RPL23AP84-201ENST00000571193 464 ntBASIC2.57□□□□□ -2
SLC1A1P43005 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.57□□□□□ -2
SLC1A1P43005 AC009163.5-201ENST00000575421 637 ntBASIC2.57□□□□□ -2
SLC1A1P43005 MIR3200-201ENST00000580767 85 ntBASIC2.57□□□□□ -2
SLC1A1P43005 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.57□□□□□ -2
SLC1A1P43005 AC020895.1-201ENST00000595362 272 ntBASIC2.57□□□□□ -2
SLC1A1P43005 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.57□□□□□ -2
SLC1A1P43005 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.57□□□□□ -2
SLC1A1P43005 VN1R92P-201ENST00000598511 928 ntBASIC2.57□□□□□ -2
SLC1A1P43005 AL596245.1-201ENST00000618994 362 ntBASIC2.57□□□□□ -2
SLC1A1P43005 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.57□□□□□ -2
SLC1A1P43005 AC110079.1-202ENST00000635213 138 ntBASIC2.57□□□□□ -2
SLC1A1P43005 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.57□□□□□ -2
SLC1A1P43005 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
SLC1A1P43005 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SLC1A1P43005 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
SLC1A1P43005 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SLC1A1P43005 RNU6-198P-201ENST00000384258 104 ntBASIC2.56□□□□□ -2
SLC1A1P43005 RNU2-25P-201ENST00000411041 191 ntBASIC2.56□□□□□ -2
SLC1A1P43005 MTND4P3-201ENST00000417829 541 ntBASIC2.56□□□□□ -2
SLC1A1P43005 MRPS36P1-201ENST00000421291 307 ntBASIC2.56□□□□□ -2
SLC1A1P43005 PTP4A1P7-201ENST00000423476 514 ntBASIC2.56□□□□□ -2
SLC1A1P43005 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.56□□□□□ -2
SLC1A1P43005 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.56□□□□□ -2
SLC1A1P43005 SDCBPP1-201ENST00000440192 890 ntBASIC2.56□□□□□ -2
SLC1A1P43005 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.56□□□□□ -2
SLC1A1P43005 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.56□□□□□ -2
SLC1A1P43005 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.56□□□□□ -2
SLC1A1P43005 AC234775.1-201ENST00000454247 670 ntBASIC2.56□□□□□ -2
SLC1A1P43005 snoU13.28-201ENST00000459235 104 ntBASIC2.56□□□□□ -2
SLC1A1P43005 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.56□□□□□ -2
SLC1A1P43005 AC114981.1-201ENST00000503897 678 ntBASIC2.56□□□□□ -2
SLC1A1P43005 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.56□□□□□ -2
SLC1A1P43005 HMGB1P28-201ENST00000507778 552 ntBASIC2.56□□□□□ -2
SLC1A1P43005 AC093677.1-201ENST00000514414 678 ntBASIC2.56□□□□□ -2
SLC1A1P43005 RNA5SP320-201ENST00000516263 124 ntBASIC2.56□□□□□ -2
SLC1A1P43005 RNA5SP402-201ENST00000517148 110 ntBASIC2.56□□□□□ -2
SLC1A1P43005 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.56□□□□□ -2
SLC1A1P43005 AP003467.2-201ENST00000520175 319 ntBASIC2.56□□□□□ -2
SLC1A1P43005 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.56□□□□□ -2
SLC1A1P43005 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.56□□□□□ -2
SLC1A1P43005 VN1R90P-201ENST00000595717 726 ntBASIC2.56□□□□□ -2
SLC1A1P43005 AL645944.1-201ENST00000603857 493 ntBASIC2.56□□□□□ -2
SLC1A1P43005 AC069304.2-201ENST00000605154 435 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms