Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL9A1P20849 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL9A1P20849 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL9A1P20849 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
COL9A1P20849 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL9A1P20849 MAK-202ENST00000354489 3941 ntTSL 5 BASIC5.99□□□□□ -1.45
COL9A1P20849 FTLP6-201ENST00000355274 422 ntBASIC5.99□□□□□ -1.45
COL9A1P20849 RNU4-11P-201ENST00000365287 132 ntBASIC5.99□□□□□ -1.45
COL9A1P20849 RNU6-968P-201ENST00000384076 107 ntBASIC5.99□□□□□ -1.45
COL9A1P20849 RNU6-1064P-201ENST00000410626 104 ntBASIC5.99□□□□□ -1.45
COL9A1P20849 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.99□□□□□ -1.45
COL9A1P20849 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC5.99□□□□□ -1.45
COL9A1P20849 AL357134.1-201ENST00000445848 426 ntBASIC5.99□□□□□ -1.45
COL9A1P20849 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.99□□□□□ -1.45
COL9A1P20849 RN7SL41P-201ENST00000476144 297 ntBASIC5.99□□□□□ -1.45
COL9A1P20849 SNRPCP2-201ENST00000504370 475 ntBASIC5.99□□□□□ -1.45
COL9A1P20849 RNA5SP471-201ENST00000516971 106 ntBASIC5.99□□□□□ -1.45
COL9A1P20849 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.99□□□□□ -1.45
COL9A1P20849 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.99□□□□□ -1.45
COL9A1P20849 AC004825.2-201ENST00000616634 455 ntBASIC5.99□□□□□ -1.45
COL9A1P20849 AC074140.1-201ENST00000621617 208 ntBASIC5.99□□□□□ -1.45
COL9A1P20849 AL360181.4-201ENST00000621752 134 ntBASIC5.99□□□□□ -1.45
COL9A1P20849 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.99□□□□□ -1.45
COL9A1P20849 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.99□□□□□ -1.45
COL9A1P20849 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL9A1P20849 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC5.99□□□□□ -1.45
COL9A1P20849 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL9A1P20849 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.99□□□□□ -1.45
COL9A1P20849 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL9A1P20849 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL9A1P20849 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL9A1P20849 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL9A1P20849 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.99□□□□□ -1.45
COL9A1P20849 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL9A1P20849 AP005435.3-201ENST00000531260 3198 ntBASIC5.99□□□□□ -1.45
COL9A1P20849 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL9A1P20849 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL9A1P20849 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL9A1P20849 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL9A1P20849 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL9A1P20849 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL9A1P20849 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.98□□□□□ -1.45
COL9A1P20849 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL9A1P20849 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL9A1P20849 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL9A1P20849 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
COL9A1P20849 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL9A1P20849 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
COL9A1P20849 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL9A1P20849 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.98□□□□□ -1.45
COL9A1P20849 OR9K1P-202ENST00000641111 3217 ntBASIC5.98□□□□□ -1.45
COL9A1P20849 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL9A1P20849 AC110491.1-201ENST00000562191 2010 ntBASIC5.98□□□□□ -1.45
COL9A1P20849 AC010168.2-201ENST00000562691 5428 ntBASIC5.98□□□□□ -1.45
COL9A1P20849 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL9A1P20849 RNU5A-1-201ENST00000362698 116 ntBASIC5.98□□□□□ -1.45
COL9A1P20849 RNU6-899P-201ENST00000363947 107 ntBASIC5.98□□□□□ -1.45
COL9A1P20849 RNU6-270P-201ENST00000364131 105 ntBASIC5.98□□□□□ -1.45
COL9A1P20849 RNU6-213P-201ENST00000384051 104 ntBASIC5.98□□□□□ -1.45
COL9A1P20849 MIR32-201ENST00000384965 70 ntBASIC5.98□□□□□ -1.45
COL9A1P20849 MIR34A-201ENST00000385130 110 ntBASIC5.98□□□□□ -1.45
COL9A1P20849 AC005154.2-201ENST00000438110 379 ntBASIC5.98□□□□□ -1.45
COL9A1P20849 AC124916.1-201ENST00000444020 547 ntBASIC5.98□□□□□ -1.45
COL9A1P20849 AL353705.4-201ENST00000449661 238 ntBASIC5.98□□□□□ -1.45
COL9A1P20849 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.98□□□□□ -1.45
COL9A1P20849 AC005042.3-201ENST00000453230 174 ntBASIC5.98□□□□□ -1.45
COL9A1P20849 RPL10P17-201ENST00000453852 316 ntBASIC5.98□□□□□ -1.45
COL9A1P20849 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.98□□□□□ -1.45
COL9A1P20849 BX284632.1-201ENST00000478218 541 ntBASIC5.98□□□□□ -1.45
COL9A1P20849 IGLV2-34-201ENST00000490007 283 ntBASIC5.98□□□□□ -1.45
COL9A1P20849 AP004242.1-201ENST00000533701 349 ntBASIC5.98□□□□□ -1.45
COL9A1P20849 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.98□□□□□ -1.45
COL9A1P20849 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.98□□□□□ -1.45
COL9A1P20849 DNAJC19P2-201ENST00000593340 302 ntBASIC5.98□□□□□ -1.45
COL9A1P20849 AC005176.2-201ENST00000596933 147 ntBASIC5.98□□□□□ -1.45
COL9A1P20849 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.98□□□□□ -1.45
COL9A1P20849 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.98□□□□□ -1.45
COL9A1P20849 MIR4496-201ENST00000635896 61 ntBASIC5.98□□□□□ -1.45
COL9A1P20849 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.98□□□□□ -1.45
COL9A1P20849 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL9A1P20849 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
COL9A1P20849 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL9A1P20849 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
COL9A1P20849 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.98□□□□□ -1.45
COL9A1P20849 AP005432.1-201ENST00000580891 3485 ntBASIC5.98□□□□□ -1.45
COL9A1P20849 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL9A1P20849 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL9A1P20849 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.98□□□□□ -1.45
COL9A1P20849 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.97□□□□□ -1.45
COL9A1P20849 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL9A1P20849 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL9A1P20849 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL9A1P20849 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL9A1P20849 AC092593.1-201ENST00000515413 1815 ntBASIC5.97□□□□□ -1.45
COL9A1P20849 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
COL9A1P20849 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL9A1P20849 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
COL9A1P20849 AC022819.1-201ENST00000563495 3910 ntBASIC5.97□□□□□ -1.45
COL9A1P20849 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL9A1P20849 RNU6-755P-201ENST00000364400 103 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms