Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.34□□□□□ -1.55
LMNB1P20700 AC032011.1-201ENST00000611703 1549 ntBASIC5.34□□□□□ -1.55
LMNB1P20700 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LMNB1P20700 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.34□□□□□ -1.55
LMNB1P20700 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.34□□□□□ -1.55
LMNB1P20700 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LMNB1P20700 RNU5E-6P-201ENST00000365574 115 ntBASIC5.34□□□□□ -1.55
LMNB1P20700 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.34□□□□□ -1.55
LMNB1P20700 SNORA24.1-201ENST00000384401 135 ntBASIC5.34□□□□□ -1.55
LMNB1P20700 AL359634.1-202ENST00000404721 284 ntBASIC5.34□□□□□ -1.55
LMNB1P20700 RNU2-29P-201ENST00000410423 189 ntBASIC5.34□□□□□ -1.55
LMNB1P20700 HMGB1P25-201ENST00000468402 607 ntBASIC5.34□□□□□ -1.55
LMNB1P20700 AC091885.1-201ENST00000506658 268 ntBASIC5.34□□□□□ -1.55
LMNB1P20700 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.34□□□□□ -1.55
LMNB1P20700 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.34□□□□□ -1.55
LMNB1P20700 AC099522.1-202ENST00000514718 367 ntBASIC5.34□□□□□ -1.55
LMNB1P20700 RNU6-1045P-201ENST00000516321 107 ntBASIC5.34□□□□□ -1.55
LMNB1P20700 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.34□□□□□ -1.55
LMNB1P20700 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.34□□□□□ -1.55
LMNB1P20700 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.34□□□□□ -1.55
LMNB1P20700 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.34□□□□□ -1.55
LMNB1P20700 BPIFA4P-203ENST00000603168 689 ntBASIC5.34□□□□□ -1.55
LMNB1P20700 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.34□□□□□ -1.55
LMNB1P20700 AC092807.2-201ENST00000609367 243 ntBASIC5.34□□□□□ -1.55
LMNB1P20700 FAM27D1-201ENST00000612308 341 ntBASIC5.34□□□□□ -1.55
LMNB1P20700 uc_338.15-201ENST00000615470 191 ntBASIC5.34□□□□□ -1.55
LMNB1P20700 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
LMNB1P20700 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
LMNB1P20700 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LMNB1P20700 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.34□□□□□ -1.55
LMNB1P20700 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.34□□□□□ -1.55
LMNB1P20700 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
LMNB1P20700 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.34□□□□□ -1.55
LMNB1P20700 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.34□□□□□ -1.56
LMNB1P20700 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
LMNB1P20700 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
LMNB1P20700 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.56
LMNB1P20700 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
LMNB1P20700 AL445487.1-201ENST00000415694 1580 ntBASIC5.33□□□□□ -1.56
LMNB1P20700 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
LMNB1P20700 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
LMNB1P20700 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
LMNB1P20700 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.33□□□□□ -1.56
LMNB1P20700 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
LMNB1P20700 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.33□□□□□ -1.56
LMNB1P20700 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.33□□□□□ -1.56
LMNB1P20700 MIR369-201ENST00000362155 70 ntBASIC5.33□□□□□ -1.56
LMNB1P20700 RNU11-4P-201ENST00000391149 133 ntBASIC5.33□□□□□ -1.56
LMNB1P20700 MIR548P-201ENST00000408336 84 ntBASIC5.33□□□□□ -1.56
LMNB1P20700 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.33□□□□□ -1.56
LMNB1P20700 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.33□□□□□ -1.56
LMNB1P20700 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.33□□□□□ -1.56
LMNB1P20700 AC004938.1-201ENST00000438468 308 ntBASIC5.33□□□□□ -1.56
LMNB1P20700 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.33□□□□□ -1.56
LMNB1P20700 IFNWP4-201ENST00000453148 294 ntBASIC5.33□□□□□ -1.56
LMNB1P20700 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.33□□□□□ -1.56
LMNB1P20700 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.33□□□□□ -1.56
LMNB1P20700 AC007967.1-201ENST00000455422 1159 ntBASIC5.33□□□□□ -1.56
LMNB1P20700 VN1R17P-201ENST00000472048 1090 ntBASIC5.33□□□□□ -1.56
LMNB1P20700 RPL23AP11-201ENST00000475260 469 ntBASIC5.33□□□□□ -1.56
LMNB1P20700 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.33□□□□□ -1.56
LMNB1P20700 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.33□□□□□ -1.56
LMNB1P20700 SNORD116-26-201ENST00000516006 96 ntBASIC5.33□□□□□ -1.56
LMNB1P20700 RNU6-864P-201ENST00000516256 108 ntBASIC5.33□□□□□ -1.56
LMNB1P20700 RNU6-1088P-201ENST00000516850 104 ntBASIC5.33□□□□□ -1.56
LMNB1P20700 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.33□□□□□ -1.56
LMNB1P20700 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.33□□□□□ -1.56
LMNB1P20700 ELOCP31-201ENST00000540463 467 ntBASIC5.33□□□□□ -1.56
LMNB1P20700 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.33□□□□□ -1.56
LMNB1P20700 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.33□□□□□ -1.56
LMNB1P20700 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.33□□□□□ -1.56
LMNB1P20700 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.33□□□□□ -1.56
LMNB1P20700 AL022099.1-201ENST00000604551 712 ntBASIC5.33□□□□□ -1.56
LMNB1P20700 AC116312.1-201ENST00000606841 314 ntBASIC5.33□□□□□ -1.56
LMNB1P20700 AL133215.3-201ENST00000609801 448 ntBASIC5.33□□□□□ -1.56
LMNB1P20700 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LMNB1P20700 AP001486.3-201ENST00000615334 372 ntBASIC5.33□□□□□ -1.56
LMNB1P20700 AC084757.4-201ENST00000616350 526 ntBASIC5.33□□□□□ -1.56
LMNB1P20700 uc_338.34-201ENST00000617467 174 ntBASIC5.33□□□□□ -1.56
LMNB1P20700 AC090971.5-201ENST00000621102 293 ntBASIC5.33□□□□□ -1.56
LMNB1P20700 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.33□□□□□ -1.56
LMNB1P20700 AC134503.1-201ENST00000633048 54 ntBASIC5.33□□□□□ -1.56
LMNB1P20700 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.33□□□□□ -1.56
LMNB1P20700 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LMNB1P20700 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
LMNB1P20700 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LMNB1P20700 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LMNB1P20700 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
LMNB1P20700 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LMNB1P20700 BDP1P-201ENST00000582658 1990 ntBASIC5.33□□□□□ -1.56
LMNB1P20700 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.33□□□□□ -1.56
LMNB1P20700 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LMNB1P20700 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.32□□□□□ -1.56
LMNB1P20700 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMNB1P20700 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
LMNB1P20700 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LMNB1P20700 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
LMNB1P20700 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMNB1P20700 RNU1-14P-201ENST00000362759 152 ntBASIC5.32□□□□□ -1.56
LMNB1P20700 RNU6-179P-201ENST00000363350 107 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms