Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 SNRPEP7-201ENST00000438350 220 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 RPL7P36-201ENST00000444633 681 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXC6P09630 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC6P09630 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 SNRPFP4-201ENST00000456366 242 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 AC026410.2-201ENST00000460281 156 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HOXC6P09630 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXC6P09630 FAM172BP-201ENST00000487497 1089 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC6P09630 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXC6P09630 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC6P09630 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXC6P09630 SNORA70.19-201ENST00000516717 90 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC6P09630 AP003122.4-201ENST00000530980 758 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC6P09630 AC068587.4-201ENST00000533893 186 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXC6P09630 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC6P09630 ZNF519P2-201ENST00000557032 169 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 HSPE1P3-201ENST00000559254 309 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 AC068135.2-201ENST00000569293 1028 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 MIR548S-201ENST00000581352 82 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 VN1R79P-201ENST00000593540 513 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXC6P09630 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 uc_338.32-201ENST00000615087 172 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 AC244205.2-202ENST00000635781 342 ntBASIC3.79□□□□□ -1.8
HOXC6P09630 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXC6P09630 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXC6P09630 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXC6P09630 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HOXC6P09630 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXC6P09630 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXC6P09630 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
HOXC6P09630 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXC6P09630 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXC6P09630 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HOXC6P09630 RNA5SP197-201ENST00000363357 119 ntBASIC3.78□□□□□ -1.8
HOXC6P09630 Y_RNA.256-201ENST00000364594 104 ntBASIC3.78□□□□□ -1.8
HOXC6P09630 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC6P09630 HMGB1P17-201ENST00000403495 628 ntBASIC3.78□□□□□ -1.8
HOXC6P09630 Y_RNA.608-201ENST00000410647 95 ntBASIC3.78□□□□□ -1.8
HOXC6P09630 BX890604.2-201ENST00000427883 474 ntBASIC3.78□□□□□ -1.8
HOXC6P09630 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC6P09630 AL451074.3-201ENST00000437709 472 ntBASIC3.78□□□□□ -1.8
HOXC6P09630 RPL23AP16-201ENST00000441715 421 ntBASIC3.78□□□□□ -1.8
HOXC6P09630 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC6P09630 MTND6P13-201ENST00000443510 523 ntBASIC3.78□□□□□ -1.8
HOXC6P09630 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXC6P09630 AC002381.1-201ENST00000447049 280 ntBASIC3.78□□□□□ -1.8
HOXC6P09630 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXC6P09630 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXC6P09630 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXC6P09630 MTND1P3-201ENST00000484956 952 ntBASIC3.78□□□□□ -1.8
HOXC6P09630 AC096576.1-201ENST00000489014 359 ntBASIC3.78□□□□□ -1.8
HOXC6P09630 FAM92A1P2-202ENST00000504766 877 ntBASIC3.78□□□□□ -1.8
HOXC6P09630 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXC6P09630 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC6P09630 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC6P09630 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC6P09630 IGLVIV-53-201ENST00000520107 367 ntBASIC3.78□□□□□ -1.8
HOXC6P09630 AC022790.1-201ENST00000522872 204 ntBASIC3.78□□□□□ -1.8
HOXC6P09630 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.78□□□□□ -1.8
HOXC6P09630 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.78□□□□□ -1.8
HOXC6P09630 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXC6P09630 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC6P09630 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC6P09630 HIGD1AP1-201ENST00000550979 275 ntBASIC3.78□□□□□ -1.8
HOXC6P09630 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXC6P09630 RPL21P5-201ENST00000554662 472 ntBASIC3.78□□□□□ -1.8
HOXC6P09630 MIR4504-201ENST00000577413 92 ntBASIC3.78□□□□□ -1.8
HOXC6P09630 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXC6P09630 HMGN1P30-201ENST00000589286 268 ntBASIC3.78□□□□□ -1.8
HOXC6P09630 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.78□□□□□ -1.8
HOXC6P09630 AC093732.2-201ENST00000607950 274 ntBASIC3.78□□□□□ -1.8
HOXC6P09630 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXC6P09630 AC108479.2-201ENST00000617314 601 ntBASIC3.78□□□□□ -1.8
HOXC6P09630 AC006386.2-201ENST00000624491 75 ntBASIC3.78□□□□□ -1.8
HOXC6P09630 AC012005.1-201ENST00000624575 75 ntBASIC3.78□□□□□ -1.8
HOXC6P09630 MIR6863-201ENST00000636112 90 ntBASIC3.78□□□□□ -1.8
HOXC6P09630 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HOXC6P09630 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXC6P09630 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXC6P09630 XPOTP1-201ENST00000443317 2398 ntBASIC3.77□□□□□ -1.81
HOXC6P09630 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC6P09630 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC6P09630 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC6P09630 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXC6P09630 RNU1-140P-201ENST00000365040 165 ntBASIC3.77□□□□□ -1.81
HOXC6P09630 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXC6P09630 SNORA44-201ENST00000384584 132 ntBASIC3.77□□□□□ -1.81
HOXC6P09630 RNU6-780P-201ENST00000391030 104 ntBASIC3.77□□□□□ -1.81
HOXC6P09630 CCNG1P1-201ENST00000406783 885 ntBASIC3.77□□□□□ -1.81
HOXC6P09630 MIR1305-201ENST00000408300 86 ntBASIC3.77□□□□□ -1.81
HOXC6P09630 RN7SKP266-201ENST00000410232 287 ntBASIC3.77□□□□□ -1.81
HOXC6P09630 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXC6P09630 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms