Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC133473.1-201ENST00000455173 299 ntBASIC5.05□□□□□ -1.6
PDGFAP04085 AC110792.1-201ENST00000491826 472 ntBASIC5.05□□□□□ -1.6
PDGFAP04085 AC083829.1-201ENST00000503756 657 ntBASIC5.05□□□□□ -1.6
PDGFAP04085 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.05□□□□□ -1.6
PDGFAP04085 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.05□□□□□ -1.6
PDGFAP04085 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.05□□□□□ -1.6
PDGFAP04085 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.05□□□□□ -1.6
PDGFAP04085 FAM25E-202ENST00000608562 189 ntBASIC5.05□□□□□ -1.6
PDGFAP04085 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
PDGFAP04085 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
PDGFAP04085 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFAP04085 AC004925.1-201ENST00000624256 2706 ntBASIC5.04□□□□□ -1.6
PDGFAP04085 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFAP04085 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFAP04085 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
PDGFAP04085 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.04□□□□□ -1.6
PDGFAP04085 AC020656.2-201ENST00000613291 5309 ntBASIC5.04□□□□□ -1.6
PDGFAP04085 OR4G2P-202ENST00000641004 1759 ntBASIC5.04□□□□□ -1.6
PDGFAP04085 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFAP04085 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFAP04085 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFAP04085 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.04□□□□□ -1.6
PDGFAP04085 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
PDGFAP04085 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PDGFAP04085 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFAP04085 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFAP04085 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFAP04085 DEFB108F-201ENST00000344638 222 ntBASIC5.04□□□□□ -1.6
PDGFAP04085 Y_RNA.276-201ENST00000364732 109 ntBASIC5.04□□□□□ -1.6
PDGFAP04085 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PDGFAP04085 AC093162.1-201ENST00000419682 124 ntBASIC5.04□□□□□ -1.6
PDGFAP04085 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.04□□□□□ -1.6
PDGFAP04085 SRSF1P1-201ENST00000424058 520 ntBASIC5.04□□□□□ -1.6
PDGFAP04085 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.04□□□□□ -1.6
PDGFAP04085 RPS24P13-201ENST00000442520 397 ntBASIC5.04□□□□□ -1.6
PDGFAP04085 MTCO3P8-201ENST00000453691 755 ntBASIC5.04□□□□□ -1.6
PDGFAP04085 AF213884.1-201ENST00000488102 463 ntBASIC5.04□□□□□ -1.6
PDGFAP04085 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.04□□□□□ -1.6
PDGFAP04085 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFAP04085 HMGN1P11-201ENST00000508668 303 ntBASIC5.04□□□□□ -1.6
PDGFAP04085 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.04□□□□□ -1.6
PDGFAP04085 RNU6-408P-201ENST00000515910 100 ntBASIC5.04□□□□□ -1.6
PDGFAP04085 RNU2-53P-201ENST00000516257 147 ntBASIC5.04□□□□□ -1.6
PDGFAP04085 Y_RNA.687-201ENST00000516558 91 ntBASIC5.04□□□□□ -1.6
PDGFAP04085 HMGB1P40-201ENST00000525121 540 ntBASIC5.04□□□□□ -1.6
PDGFAP04085 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.04□□□□□ -1.6
PDGFAP04085 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFAP04085 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.04□□□□□ -1.6
PDGFAP04085 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.04□□□□□ -1.6
PDGFAP04085 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.04□□□□□ -1.6
PDGFAP04085 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.04□□□□□ -1.6
PDGFAP04085 AC233702.9-201ENST00000581528 203 ntBASIC5.04□□□□□ -1.6
PDGFAP04085 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.04□□□□□ -1.6
PDGFAP04085 MIR4480-201ENST00000582492 71 ntBASIC5.04□□□□□ -1.6
PDGFAP04085 AC069307.1-201ENST00000602820 447 ntBASIC5.04□□□□□ -1.6
PDGFAP04085 AP000787.2-201ENST00000604432 568 ntBASIC5.04□□□□□ -1.6
PDGFAP04085 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.04□□□□□ -1.6
PDGFAP04085 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.04□□□□□ -1.6
PDGFAP04085 AC091953.3-201ENST00000623220 236 ntBASIC5.04□□□□□ -1.6
PDGFAP04085 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.04□□□□□ -1.6
PDGFAP04085 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFAP04085 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
PDGFAP04085 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFAP04085 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.04□□□□□ -1.6
PDGFAP04085 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PDGFAP04085 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFAP04085 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PDGFAP04085 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFAP04085 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PDGFAP04085 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFAP04085 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
PDGFAP04085 RNU4-44P-201ENST00000363050 141 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 RNA5SP235-201ENST00000365411 114 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 SNORA70.6-201ENST00000383934 134 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFAP04085 RPL21P1-201ENST00000399532 476 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 AL591034.2-201ENST00000402839 359 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 AL096701.2-201ENST00000416920 238 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.03□□□□□ -1.6
PDGFAP04085 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.03□□□□□ -1.6
PDGFAP04085 AC006466.1-201ENST00000438721 289 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 RPS3AP12-201ENST00000443616 753 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 CHEK2P4-201ENST00000450340 246 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.03□□□□□ -1.6
PDGFAP04085 AC107222.1-201ENST00000510899 637 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.03□□□□□ -1.6
PDGFAP04085 AC144568.1-201ENST00000520139 137 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 IGHV3-76-201ENST00000522465 295 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.03□□□□□ -1.6
PDGFAP04085 AP004371.1-201ENST00000525240 214 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 AP000889.1-201ENST00000530968 660 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFAP04085 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.03□□□□□ -1.6
PDGFAP04085 AC006600.1-201ENST00000572529 153 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 CPDP1-201ENST00000579660 283 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PDGFAP04085 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.03□□□□□ -1.6
PDGFAP04085 VN1R91P-201ENST00000594377 169 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms