Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
ACTN4O43707 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.08□□□□□ -1.44
ACTN4O43707 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
ACTN4O43707 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
ACTN4O43707 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.07□□□□□ -1.44
ACTN4O43707 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
ACTN4O43707 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ACTN4O43707 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ACTN4O43707 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
ACTN4O43707 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.07□□□□□ -1.44
ACTN4O43707 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.07□□□□□ -1.44
ACTN4O43707 RN7SKP81-201ENST00000365603 331 ntBASIC6.07□□□□□ -1.44
ACTN4O43707 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC6.07□□□□□ -1.44
ACTN4O43707 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC6.07□□□□□ -1.44
ACTN4O43707 AL353621.1-201ENST00000418219 243 ntBASIC6.07□□□□□ -1.44
ACTN4O43707 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.07□□□□□ -1.44
ACTN4O43707 MTCO1P5-201ENST00000433573 344 ntBASIC6.07□□□□□ -1.44
ACTN4O43707 RPL19P16-201ENST00000433839 588 ntBASIC6.07□□□□□ -1.44
ACTN4O43707 RPL26P6-201ENST00000440913 438 ntBASIC6.07□□□□□ -1.44
ACTN4O43707 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ACTN4O43707 SNORD46.2-201ENST00000516021 102 ntBASIC6.07□□□□□ -1.44
ACTN4O43707 RNU6-914P-201ENST00000516749 109 ntBASIC6.07□□□□□ -1.44
ACTN4O43707 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.07□□□□□ -1.44
ACTN4O43707 AC010547.6-201ENST00000571789 193 ntBASIC6.07□□□□□ -1.44
ACTN4O43707 RN7SL356P-201ENST00000582228 248 ntBASIC6.07□□□□□ -1.44
ACTN4O43707 AC009318.2-201ENST00000610917 651 ntBASIC6.07□□□□□ -1.44
ACTN4O43707 AC018445.2-201ENST00000622987 260 ntBASIC6.07□□□□□ -1.44
ACTN4O43707 MTND1P7-201ENST00000632801 297 ntBASIC6.07□□□□□ -1.44
ACTN4O43707 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.07□□□□□ -1.44
ACTN4O43707 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ACTN4O43707 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.07□□□□□ -1.44
ACTN4O43707 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ACTN4O43707 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ACTN4O43707 AC092376.2-201ENST00000622621 4116 ntBASIC6.07□□□□□ -1.44
ACTN4O43707 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ACTN4O43707 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
ACTN4O43707 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ACTN4O43707 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
ACTN4O43707 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.07□□□□□ -1.44
ACTN4O43707 STK31-205ENST00000433467 3085 ntTSL 2 BASIC6.07□□□□□ -1.44
ACTN4O43707 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ACTN4O43707 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
ACTN4O43707 AC020633.1-201ENST00000468439 2247 ntBASIC6.06□□□□□ -1.44
ACTN4O43707 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.06□□□□□ -1.44
ACTN4O43707 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ACTN4O43707 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ACTN4O43707 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ACTN4O43707 RNU6-326P-201ENST00000365480 107 ntBASIC6.06□□□□□ -1.44
ACTN4O43707 Y_RNA.504-201ENST00000384481 104 ntBASIC6.06□□□□□ -1.44
ACTN4O43707 GLULP6-201ENST00000399502 913 ntBASIC6.06□□□□□ -1.44
ACTN4O43707 RNU2-61P-201ENST00000411069 191 ntBASIC6.06□□□□□ -1.44
ACTN4O43707 SRSF1P1-201ENST00000424058 520 ntBASIC6.06□□□□□ -1.44
ACTN4O43707 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.06□□□□□ -1.44
ACTN4O43707 HMGB1P27-201ENST00000431429 603 ntBASIC6.06□□□□□ -1.44
ACTN4O43707 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.06□□□□□ -1.44
ACTN4O43707 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC6.06□□□□□ -1.44
ACTN4O43707 RNU2-31P-201ENST00000516954 155 ntBASIC6.06□□□□□ -1.44
ACTN4O43707 AP004607.2-201ENST00000533949 322 ntBASIC6.06□□□□□ -1.44
ACTN4O43707 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.06□□□□□ -1.44
ACTN4O43707 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.06□□□□□ -1.44
ACTN4O43707 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ACTN4O43707 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.06□□□□□ -1.44
ACTN4O43707 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.06□□□□□ -1.44
ACTN4O43707 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC6.06□□□□□ -1.44
ACTN4O43707 AC009314.1-201ENST00000603871 304 ntBASIC6.06□□□□□ -1.44
ACTN4O43707 AC004852.3-201ENST00000614131 326 ntBASIC6.06□□□□□ -1.44
ACTN4O43707 MIR6130-201ENST00000619419 109 ntBASIC6.06□□□□□ -1.44
ACTN4O43707 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
ACTN4O43707 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
ACTN4O43707 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ACTN4O43707 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
ACTN4O43707 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ACTN4O43707 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ACTN4O43707 MAPK10-338ENST00000641647 3362 ntBASIC6.06□□□□□ -1.44
ACTN4O43707 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
ACTN4O43707 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
ACTN4O43707 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
ACTN4O43707 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ACTN4O43707 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
ACTN4O43707 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ACTN4O43707 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.05□□□□□ -1.44
ACTN4O43707 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
ACTN4O43707 AC063979.1-201ENST00000415539 377 ntBASIC6.05□□□□□ -1.44
ACTN4O43707 RPS15AP40-201ENST00000419621 391 ntBASIC6.05□□□□□ -1.44
ACTN4O43707 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC6.05□□□□□ -1.44
ACTN4O43707 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC6.05□□□□□ -1.44
ACTN4O43707 AC092754.1-201ENST00000472975 479 ntBASIC6.05□□□□□ -1.44
ACTN4O43707 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.05□□□□□ -1.44
ACTN4O43707 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.05□□□□□ -1.44
ACTN4O43707 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC6.05□□□□□ -1.44
ACTN4O43707 RN7SKP258-201ENST00000517151 304 ntBASIC6.05□□□□□ -1.44
ACTN4O43707 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.05□□□□□ -1.44
ACTN4O43707 AL049872.1-201ENST00000556323 322 ntBASIC6.05□□□□□ -1.44
ACTN4O43707 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.05□□□□□ -1.44
ACTN4O43707 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.05□□□□□ -1.44
ACTN4O43707 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.05□□□□□ -1.44
ACTN4O43707 MIR4659A-201ENST00000580269 81 ntBASIC6.05□□□□□ -1.44
ACTN4O43707 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC6.05□□□□□ -1.44
ACTN4O43707 AC132068.1-201ENST00000623805 459 ntBASIC6.05□□□□□ -1.44
ACTN4O43707 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms