Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.88□□□□□ -1.95
CDX4O14627 AC091931.1-201ENST00000623488 728 ntBASIC2.88□□□□□ -1.95
CDX4O14627 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CDX4O14627 AC091925.2-201ENST00000625059 256 ntBASIC2.88□□□□□ -1.95
CDX4O14627 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDX4O14627 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.88□□□□□ -1.95
CDX4O14627 CRYM-AS1-204ENST00000637983 556 ntBASIC2.88□□□□□ -1.95
CDX4O14627 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC2.88□□□□□ -1.95
CDX4O14627 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CDX4O14627 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDX4O14627 AC096644.4-201ENST00000563417 2912 ntBASIC2.88□□□□□ -1.95
CDX4O14627 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDX4O14627 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDX4O14627 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.87□□□□□ -1.95
CDX4O14627 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.87□□□□□ -1.95
CDX4O14627 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDX4O14627 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CDX4O14627 ELL2P3-201ENST00000457883 1602 ntBASIC2.87□□□□□ -1.95
CDX4O14627 RNU6-553P-201ENST00000364047 96 ntBASIC2.87□□□□□ -1.95
CDX4O14627 SNORA4.1-201ENST00000364263 144 ntBASIC2.87□□□□□ -1.95
CDX4O14627 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDX4O14627 SNORD116-9-201ENST00000384000 95 ntBASIC2.87□□□□□ -1.95
CDX4O14627 SNORA70B-201ENST00000384210 135 ntBASIC2.87□□□□□ -1.95
CDX4O14627 SNORD116-3-201ENST00000384287 95 ntBASIC2.87□□□□□ -1.95
CDX4O14627 SNORD116-7-201ENST00000384404 95 ntBASIC2.87□□□□□ -1.95
CDX4O14627 SNORD116-5-201ENST00000384462 95 ntBASIC2.87□□□□□ -1.95
CDX4O14627 AL021407.1-201ENST00000404531 386 ntBASIC2.87□□□□□ -1.95
CDX4O14627 TPMTP2-201ENST00000414372 726 ntBASIC2.87□□□□□ -1.95
CDX4O14627 RAD23BP2-201ENST00000416003 1207 ntBASIC2.87□□□□□ -1.95
CDX4O14627 SEPT2P1-201ENST00000419651 180 ntBASIC2.87□□□□□ -1.95
CDX4O14627 AC099677.1-201ENST00000420575 175 ntBASIC2.87□□□□□ -1.95
CDX4O14627 NEK4P1-201ENST00000433383 879 ntBASIC2.87□□□□□ -1.95
CDX4O14627 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.87□□□□□ -1.95
CDX4O14627 RPS20P5-201ENST00000434808 360 ntBASIC2.87□□□□□ -1.95
CDX4O14627 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.87□□□□□ -1.95
CDX4O14627 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CDX4O14627 RPL23AP35-201ENST00000451906 501 ntBASIC2.87□□□□□ -1.95
CDX4O14627 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.87□□□□□ -1.95
CDX4O14627 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.87□□□□□ -1.95
CDX4O14627 AC010285.1-201ENST00000470580 392 ntBASIC2.87□□□□□ -1.95
CDX4O14627 AC128713.1-201ENST00000471495 306 ntBASIC2.87□□□□□ -1.95
CDX4O14627 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.87□□□□□ -1.95
CDX4O14627 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.87□□□□□ -1.95
CDX4O14627 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.87□□□□□ -1.95
CDX4O14627 AC147055.4-201ENST00000504399 745 ntBASIC2.87□□□□□ -1.95
CDX4O14627 COX7A2P2-201ENST00000505291 250 ntBASIC2.87□□□□□ -1.95
CDX4O14627 HMGB1P22-201ENST00000505315 124 ntBASIC2.87□□□□□ -1.95
CDX4O14627 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.87□□□□□ -1.95
CDX4O14627 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.87□□□□□ -1.95
CDX4O14627 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.87□□□□□ -1.95
CDX4O14627 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC2.87□□□□□ -1.95
CDX4O14627 OR5BM1P-201ENST00000512021 366 ntBASIC2.87□□□□□ -1.95
CDX4O14627 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CDX4O14627 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.87□□□□□ -1.95
CDX4O14627 OR5G4P-201ENST00000525251 760 ntBASIC2.87□□□□□ -1.95
CDX4O14627 HIGD1AP10-201ENST00000527837 282 ntBASIC2.87□□□□□ -1.95
CDX4O14627 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.87□□□□□ -1.95
CDX4O14627 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.87□□□□□ -1.95
CDX4O14627 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.87□□□□□ -1.95
CDX4O14627 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.87□□□□□ -1.95
CDX4O14627 AC002400.1-201ENST00000569310 726 ntBASIC2.87□□□□□ -1.95
CDX4O14627 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.87□□□□□ -1.95
CDX4O14627 MIR3186-201ENST00000577404 85 ntBASIC2.87□□□□□ -1.95
CDX4O14627 AC090615.1-201ENST00000577519 154 ntBASIC2.87□□□□□ -1.95
CDX4O14627 AC024153.1-201ENST00000603103 365 ntBASIC2.87□□□□□ -1.95
CDX4O14627 AC105129.3-201ENST00000605455 485 ntBASIC2.87□□□□□ -1.95
CDX4O14627 AL590282.1-201ENST00000610379 1136 ntBASIC2.87□□□□□ -1.95
CDX4O14627 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CDX4O14627 AL590808.1-201ENST00000618696 141 ntBASIC2.87□□□□□ -1.95
CDX4O14627 XIST_intron.1-201ENST00000619444 68 ntBASIC2.87□□□□□ -1.95
CDX4O14627 AC018755.4-201ENST00000619715 454 ntBASIC2.87□□□□□ -1.95
CDX4O14627 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CDX4O14627 AC007494.3-201ENST00000624660 743 ntBASIC2.87□□□□□ -1.95
CDX4O14627 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.87□□□□□ -1.95
CDX4O14627 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.87□□□□□ -1.95
CDX4O14627 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.87□□□□□ -1.95
CDX4O14627 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDX4O14627 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDX4O14627 MTND4P34-201ENST00000572715 1371 ntBASIC2.87□□□□□ -1.95
CDX4O14627 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDX4O14627 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CDX4O14627 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDX4O14627 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDX4O14627 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDX4O14627 RNU6-28P-201ENST00000362378 107 ntBASIC2.86□□□□□ -1.95
CDX4O14627 RNU6-931P-201ENST00000363850 107 ntBASIC2.86□□□□□ -1.95
CDX4O14627 RNU5A-2P-201ENST00000384337 116 ntBASIC2.86□□□□□ -1.95
CDX4O14627 Y_RNA.560-201ENST00000384689 102 ntBASIC2.86□□□□□ -1.95
CDX4O14627 MIR887-201ENST00000401258 79 ntBASIC2.86□□□□□ -1.95
CDX4O14627 AL592148.1-201ENST00000413568 445 ntBASIC2.86□□□□□ -1.95
CDX4O14627 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.86□□□□□ -1.95
CDX4O14627 MORF4L1P6-201ENST00000418771 268 ntBASIC2.86□□□□□ -1.95
CDX4O14627 AC083875.1-201ENST00000419509 405 ntBASIC2.86□□□□□ -1.95
CDX4O14627 AL590233.1-201ENST00000430017 456 ntBASIC2.86□□□□□ -1.95
CDX4O14627 ZYG11AP1-201ENST00000430329 837 ntBASIC2.86□□□□□ -1.95
CDX4O14627 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.86□□□□□ -1.95
CDX4O14627 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDX4O14627 MUPP-201ENST00000438111 566 ntBASIC2.86□□□□□ -1.95
CDX4O14627 ISCA1P2-201ENST00000438679 421 ntBASIC2.86□□□□□ -1.95
CDX4O14627 SDCBPP1-201ENST00000440192 890 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms