Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AP003355.1-201ENST00000518956 587 ntBASIC3.64□□□□□ -1.83
CUX2O14529 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.64□□□□□ -1.83
CUX2O14529 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.64□□□□□ -1.83
CUX2O14529 MIR4452-201ENST00000583004 71 ntBASIC3.64□□□□□ -1.83
CUX2O14529 OR4G1P-201ENST00000588632 938 ntBASIC3.64□□□□□ -1.83
CUX2O14529 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CUX2O14529 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.64□□□□□ -1.83
CUX2O14529 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CUX2O14529 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CUX2O14529 RNU6-444P-201ENST00000383988 108 ntBASIC3.63□□□□□ -1.83
CUX2O14529 SNORA67.5-201ENST00000391036 107 ntBASIC3.63□□□□□ -1.83
CUX2O14529 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CUX2O14529 TAF13P2-201ENST00000416876 286 ntBASIC3.63□□□□□ -1.83
CUX2O14529 CFTRP1-201ENST00000456646 183 ntBASIC3.63□□□□□ -1.83
CUX2O14529 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CUX2O14529 AC021146.8-201ENST00000507455 733 ntBASIC3.63□□□□□ -1.83
CUX2O14529 MTND1P36-201ENST00000522384 936 ntBASIC3.63□□□□□ -1.83
CUX2O14529 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.63□□□□□ -1.83
CUX2O14529 AC087894.1-201ENST00000538359 518 ntBASIC3.63□□□□□ -1.83
CUX2O14529 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.63□□□□□ -1.83
CUX2O14529 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CUX2O14529 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.63□□□□□ -1.83
CUX2O14529 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CUX2O14529 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CUX2O14529 RNU6-353P-201ENST00000364266 108 ntBASIC3.62□□□□□ -1.83
CUX2O14529 RNU6-1226P-201ENST00000384317 107 ntBASIC3.62□□□□□ -1.83
CUX2O14529 MIR16-1-201ENST00000385271 89 ntBASIC3.62□□□□□ -1.83
CUX2O14529 MT-TC-201ENST00000387405 66 ntBASIC3.62□□□□□ -1.83
CUX2O14529 SSXP10-201ENST00000402595 565 ntBASIC3.62□□□□□ -1.83
CUX2O14529 SFR1P1-201ENST00000403720 688 ntBASIC3.62□□□□□ -1.83
CUX2O14529 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.62□□□□□ -1.83
CUX2O14529 AC013262.1-201ENST00000426710 252 ntBASIC3.62□□□□□ -1.83
CUX2O14529 AP000705.1-201ENST00000454567 350 ntBASIC3.62□□□□□ -1.83
CUX2O14529 TOMM22P6-201ENST00000465035 409 ntBASIC3.62□□□□□ -1.83
CUX2O14529 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.62□□□□□ -1.83
CUX2O14529 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.62□□□□□ -1.83
CUX2O14529 AC016065.2-201ENST00000514530 444 ntBASIC3.62□□□□□ -1.83
CUX2O14529 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.62□□□□□ -1.83
CUX2O14529 IGKV2D-36-201ENST00000518643 226 ntBASIC3.62□□□□□ -1.83
CUX2O14529 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.62□□□□□ -1.83
CUX2O14529 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CUX2O14529 AC010735.1-201ENST00000567305 1026 ntBASIC3.62□□□□□ -1.83
CUX2O14529 AC006270.2-201ENST00000578523 652 ntBASIC3.62□□□□□ -1.83
CUX2O14529 LRRC37A5P-203ENST00000580181 585 ntBASIC3.62□□□□□ -1.83
CUX2O14529 MIR3670-2-201ENST00000582974 65 ntBASIC3.62□□□□□ -1.83
CUX2O14529 MIR3670-1-201ENST00000584160 65 ntBASIC3.62□□□□□ -1.83
CUX2O14529 MIR3670-3-201ENST00000584855 65 ntBASIC3.62□□□□□ -1.83
CUX2O14529 AL645944.1-201ENST00000603857 493 ntBASIC3.62□□□□□ -1.83
CUX2O14529 MIR3670-4-201ENST00000612260 65 ntBASIC3.62□□□□□ -1.83
CUX2O14529 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.62□□□□□ -1.83
CUX2O14529 AC093591.3-201ENST00000634516 308 ntBASIC3.62□□□□□ -1.83
CUX2O14529 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CUX2O14529 MTND5P35-201ENST00000557537 1720 ntBASIC3.62□□□□□ -1.83
CUX2O14529 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CUX2O14529 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CUX2O14529 OR1L1-202ENST00000373686 1083 ntBASIC3.61□□□□□ -1.83
CUX2O14529 OR5H15-201ENST00000383696 930 ntBASIC3.61□□□□□ -1.83
CUX2O14529 AC019129.1-201ENST00000403786 261 ntBASIC3.61□□□□□ -1.83
CUX2O14529 HMGB1P11-201ENST00000413899 637 ntBASIC3.61□□□□□ -1.83
CUX2O14529 RPP40P1-201ENST00000426762 456 ntBASIC3.61□□□□□ -1.83
CUX2O14529 AC009237.8-201ENST00000445492 379 ntBASIC3.61□□□□□ -1.83
CUX2O14529 HMGN2P21-201ENST00000447764 270 ntBASIC3.61□□□□□ -1.83
CUX2O14529 Z99714.1-201ENST00000450463 807 ntBASIC3.61□□□□□ -1.83
CUX2O14529 AC092902.1-201ENST00000486999 259 ntBASIC3.61□□□□□ -1.83
CUX2O14529 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.61□□□□□ -1.83
CUX2O14529 AC109471.1-201ENST00000511631 612 ntBASIC3.61□□□□□ -1.83
CUX2O14529 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.61□□□□□ -1.83
CUX2O14529 AC092470.1-201ENST00000546187 132 ntBASIC3.61□□□□□ -1.83
CUX2O14529 MIR4303-201ENST00000581299 66 ntBASIC3.61□□□□□ -1.83
CUX2O14529 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.61□□□□□ -1.83
CUX2O14529 AC098679.5-201ENST00000624394 571 ntBASIC3.61□□□□□ -1.83
CUX2O14529 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CUX2O14529 AL355578.1-201ENST00000607405 1328 ntBASIC3.61□□□□□ -1.83
CUX2O14529 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CUX2O14529 PABPC1P7-201ENST00000413177 1513 ntBASIC3.61□□□□□ -1.83
CUX2O14529 RNU5B-1-201ENST00000363286 116 ntBASIC3.6□□□□□ -1.83
CUX2O14529 U8.8-201ENST00000365399 135 ntBASIC3.6□□□□□ -1.83
CUX2O14529 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CUX2O14529 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.6□□□□□ -1.83
CUX2O14529 RPL31P2-201ENST00000413849 377 ntBASIC3.6□□□□□ -1.83
CUX2O14529 MTND4LP16-201ENST00000440828 295 ntBASIC3.6□□□□□ -1.83
CUX2O14529 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.6□□□□□ -1.83
CUX2O14529 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.6□□□□□ -1.83
CUX2O14529 AC010301.1-201ENST00000473936 355 ntBASIC3.6□□□□□ -1.83
CUX2O14529 RNU2-58P-201ENST00000516403 183 ntBASIC3.6□□□□□ -1.83
CUX2O14529 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.6□□□□□ -1.83
CUX2O14529 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.6□□□□□ -1.83
CUX2O14529 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.6□□□□□ -1.83
CUX2O14529 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.6□□□□□ -1.83
CUX2O14529 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.6□□□□□ -1.83
CUX2O14529 MIR4255-201ENST00000579351 72 ntBASIC3.6□□□□□ -1.83
CUX2O14529 AC019159.1-201ENST00000605094 187 ntBASIC3.6□□□□□ -1.83
CUX2O14529 AC022709.1-201ENST00000615967 87 ntBASIC3.6□□□□□ -1.83
CUX2O14529 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.6□□□□□ -1.83
CUX2O14529 AC006927.2-201ENST00000639256 389 ntBASIC3.6□□□□□ -1.83
CUX2O14529 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CUX2O14529 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CUX2O14529 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC3.6□□□□□ -1.83
CUX2O14529 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CUX2O14529 MTND5P31-201ENST00000419366 1374 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms