Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 Y_RNA.493-201ENST00000384422 102 ntBASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 SNORA11.1-201ENST00000408133 129 ntBASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 OR4K6P-201ENST00000416478 897 ntBASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 AL160175.1-201ENST00000428124 247 ntBASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 AC092798.1-201ENST00000458542 409 ntBASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 EIF4EP3-201ENST00000498782 656 ntBASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 MTCYBP35-201ENST00000503630 1137 ntBASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 RNA5SP61-201ENST00000516453 100 ntBASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 HMGB1P1-201ENST00000522557 636 ntBASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 SNRPGP16-201ENST00000533275 226 ntBASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 AC022880.1-201ENST00000534017 973 ntBASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 GLYCAM1-201ENST00000546596 285 ntBASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 MTCYBP28-201ENST00000566728 1132 ntBASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 MIR3117-201ENST00000584034 78 ntBASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 MTCO3P22-201ENST00000603219 784 ntBASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 AP001330.4-201ENST00000604350 154 ntBASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 SDAD1P2-201ENST00000441308 2028 ntBASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 CR848007.1-201ENST00000442354 1699 ntBASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 RNU1-62P-201ENST00000362599 164 ntBASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 RNU4-42P-201ENST00000364738 142 ntBASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 RNU6-761P-201ENST00000384148 107 ntBASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 MT-TC-201ENST00000387405 66 ntBASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 RNU6-193P-201ENST00000410977 107 ntBASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 AC009296.1-201ENST00000443146 155 ntBASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 WASF1P1-201ENST00000447560 1131 ntBASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 AC114982.2-201ENST00000461396 358 ntBASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 AC072039.1-201ENST00000477611 581 ntBASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 AL049873.1-201ENST00000480540 376 ntBASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 RPS27P26-201ENST00000494583 239 ntBASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 RPL23AP63-201ENST00000498752 471 ntBASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 AC105252.1-201ENST00000503089 286 ntBASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 PRELID3BP4-201ENST00000515476 571 ntBASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 ARL2BPP2-201ENST00000550907 489 ntBASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 AC074050.1-201ENST00000563247 211 ntBASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 AGGF1P5-201ENST00000567900 919 ntBASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 AC073111.2-201ENST00000605657 1075 ntBASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 MIR8081-201ENST00000611533 95 ntBASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 MIR6798-201ENST00000612887 67 ntBASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.27□□□□□ -2.21
TRAV1-2A0A0B4J238 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 MTND4P8-201ENST00000514997 1362 ntBASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 FAM133CP-201ENST00000332869 704 ntBASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 RNU6-1249P-201ENST00000363237 111 ntBASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 SNORA3A-201ENST00000364113 130 ntBASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 U3.20-201ENST00000390909 217 ntBASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 SNRPEP2-201ENST00000397592 279 ntBASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 AC092745.2-202ENST00000411880 369 ntBASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 RPS3AP44-201ENST00000425466 790 ntBASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 UBE2D3P1-201ENST00000436669 444 ntBASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 BNIP3P2-201ENST00000441221 577 ntBASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 RNU7-26P-201ENST00000458980 63 ntBASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 AC108157.1-201ENST00000510511 539 ntBASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 RNU4-18P-201ENST00000516751 149 ntBASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 RN7SKP96-201ENST00000516948 297 ntBASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 CYCSP26-201ENST00000534107 320 ntBASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 AC128687.1-201ENST00000605304 619 ntBASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 AC009318.2-201ENST00000610917 651 ntBASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms