Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 LINC01963-201ENST00000562038 3148 ntBASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU2-71P-201ENST00000411395 189 ntBASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 AC007161.1-204ENST00000423039 460 ntBASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 PIGPP3-201ENST00000425307 415 ntBASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 AC092573.2-201ENST00000434546 243 ntBASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 AC073465.2-201ENST00000440938 498 ntBASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 AL359073.1-201ENST00000448036 403 ntBASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 ABCC13-202ENST00000463099 3842 ntBASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 RN7SKP92-201ENST00000517266 244 ntBASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 AC022968.1-201ENST00000567372 442 ntBASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 MIR8076-201ENST00000611401 83 ntBASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 AC137590.2-201ENST00000619709 240 ntBASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 Z75746.1-201ENST00000440243 2080 ntBASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
PCDHGA11Q9Y5H2 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 MIR412-201ENST00000362142 91 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-37P-201ENST00000362692 107 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-1167P-201ENST00000363227 94 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-173P-201ENST00000364215 104 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-11P-201ENST00000364234 107 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-7-201ENST00000364784 107 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-8-201ENST00000365467 107 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-25P-201ENST00000383873 107 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-1-201ENST00000383898 107 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-48P-201ENST00000384161 107 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-36P-201ENST00000384172 107 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-4P-201ENST00000384205 107 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-5P-201ENST00000384238 107 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-3P-201ENST00000384314 107 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-16P-201ENST00000384385 107 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-15P-201ENST00000384534 107 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-2-201ENST00000384627 107 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-29P-201ENST00000384637 107 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-9-201ENST00000384776 107 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 MIR551A-201ENST00000385042 96 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 AL158156.1-201ENST00000422509 473 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 NDUFB4P8-201ENST00000435351 367 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 HMGN1P2-201ENST00000445197 310 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 AL589765.3-201ENST00000446084 462 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 RN7SL799P-201ENST00000475891 298 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 AC008958.1-201ENST00000511047 682 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 Y_RNA.713-201ENST00000517013 96 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 AC005363.1-201ENST00000530779 351 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 AC098826.3-201ENST00000603823 466 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 AC009314.1-201ENST00000603871 304 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-6P-201ENST00000606623 107 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 AC025574.2-201ENST00000615621 514 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 uc_338.7-201ENST00000621834 124 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 AL353748.2-201ENST00000622148 471 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 SRRM1P3-201ENST00000426911 2678 ntBASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA11Q9Y5H2 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms