Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 HMGB1P15-201ENST00000453854 435 ntBASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 RPL39P36-201ENST00000490784 156 ntBASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 AC106872.2-201ENST00000494303 480 ntBASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 NDUFB4P9-201ENST00000511646 388 ntBASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 AC010486.1-201ENST00000511793 424 ntBASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 HSPE1P5-201ENST00000561489 272 ntBASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 AC053481.3-201ENST00000577881 843 ntBASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 RN7SL703P-201ENST00000578485 302 ntBASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 MIR6868-201ENST00000611215 58 ntBASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 AC012531.5-201ENST00000611375 151 ntBASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 RMST_3.1-201ENST00000611651 109 ntBASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 AC009233.1-201ENST00000616477 371 ntBASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 AC009161.2-201ENST00000624626 138 ntBASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTDP1Q9Y5B0 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 RNY1P12-201ENST00000364251 105 ntBASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 RNU6-767P-201ENST00000384132 107 ntBASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 AC068050.1-201ENST00000394891 380 ntBASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 MIR1250-201ENST00000408098 113 ntBASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 RNU2-37P-201ENST00000410695 177 ntBASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 RPL31P2-201ENST00000413849 377 ntBASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 AC007389.2-201ENST00000434630 306 ntBASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 AL139099.1-201ENST00000497398 403 ntBASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 AL356432.3-201ENST00000568952 465 ntBASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 RPS3AP23-202ENST00000574601 686 ntBASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 AC015917.1-201ENST00000579654 510 ntBASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 AC010928.3-201ENST00000587712 541 ntBASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 RPL23AP92-201ENST00000603609 255 ntBASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 MIR7151-201ENST00000617477 60 ntBASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 AC112204.3-201ENST00000623822 332 ntBASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 AC066616.2-201ENST00000559334 1481 ntBASIC4.69□□□□□ -1.66
CTDP1Q9Y5B0 AC097714.1-201ENST00000511272 1647 ntBASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 RNU6-1120P-201ENST00000362988 108 ntBASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 RNA5SP372-201ENST00000390836 115 ntBASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 AC069218.2-201ENST00000411665 344 ntBASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 AC007390.1-201ENST00000415722 356 ntBASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 AL358472.1-201ENST00000431295 329 ntBASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 AL606489.2-201ENST00000433886 234 ntBASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 CKS1BP5-201ENST00000434172 273 ntBASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 BNIP3P2-201ENST00000441221 577 ntBASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 HMGN2P7-201ENST00000456186 273 ntBASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 PLGLA-201ENST00000465668 449 ntBASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 AP002812.1-201ENST00000495378 474 ntBASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 IGLVIV-53-201ENST00000520107 367 ntBASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 AC100770.1-201ENST00000532310 322 ntBASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 AC091516.1-201ENST00000549191 703 ntBASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 AC025449.1-201ENST00000603896 529 ntBASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 AC005034.5-201ENST00000604219 466 ntBASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 Z84480.1-201ENST00000605131 311 ntBASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 AC006133.1-201ENST00000617106 264 ntBASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 AC024940.5-201ENST00000622889 474 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms