Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 AL606534.2-204ENST00000635008 178 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 AC032011.1-201ENST00000611703 1549 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 RNVU1-3-201ENST00000364313 161 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 AL645927.1-201ENST00000396783 406 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 RNU2-50P-201ENST00000410494 143 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 RNU2-23P-201ENST00000410545 195 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 RNU6-55P-201ENST00000411092 107 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 UBE2FP1-201ENST00000416536 447 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 AL356968.1-201ENST00000416622 474 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 OR2AM1P-201ENST00000422137 422 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 RPL30P3-201ENST00000424262 333 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 OR2AH1P-201ENST00000425717 928 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 PSMA2P3-201ENST00000429685 675 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 PTMAP6-201ENST00000439110 327 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 HSFY6P-201ENST00000445573 403 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 CYCSP34-201ENST00000458172 304 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 AC008481.1-201ENST00000463278 396 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 RN7SL515P-201ENST00000463999 297 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 AC026979.1-201ENST00000492525 396 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 RN7SL558P-201ENST00000497468 299 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 AC131281.1-201ENST00000522984 164 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 AC022616.4-201ENST00000522985 181 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 OR1F2P-201ENST00000570470 933 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 AC016727.2-201ENST00000603988 621 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 CR381572.2-201ENST00000624852 397 ntBASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.03□□□□□ -1.6
AP4E1Q9UPM8 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 IQCB2P-201ENST00000401788 1633 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 AC107068.1-201ENST00000563286 4218 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 AP000756.2-201ENST00000624168 2567 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 RNU6-1059P-201ENST00000363752 98 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 Y_RNA.380-201ENST00000365663 111 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 RNU6-339P-201ENST00000384310 107 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 MIR105-2-201ENST00000385083 81 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 RNU11-4P-201ENST00000391149 133 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 RPS15AP40-201ENST00000419621 391 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 EIF4HP2-201ENST00000424380 563 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 CKS1BP6-201ENST00000424932 240 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 PSMD10P3-201ENST00000437000 448 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 RPL23AP33-201ENST00000442301 452 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 AL359672.1-201ENST00000442302 409 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 AL591623.2-201ENST00000449978 222 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 RN7SL214P-201ENST00000487317 265 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 AC068781.1-201ENST00000488231 618 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 DEFB109F-201ENST00000491870 277 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 Y_RNA.680-201ENST00000516441 93 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 AC008033.2-201ENST00000542626 177 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 AC044860.2-201ENST00000561005 179 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 AC011487.3-201ENST00000593607 453 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms