Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AP006587.4-201ENST00000526053 529 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.32□□□□□ -1.56
CNTN3Q9P232 MIR3667-201ENST00000581025 74 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 AC011494.1-201ENST00000596454 237 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CNTN3Q9P232 AL161423.1-201ENST00000613700 262 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 AC019206.1-201ENST00000621938 425 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 AC243312.2-201ENST00000623340 601 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.32□□□□□ -1.56
CNTN3Q9P232 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTN3Q9P232 SAMMSON-226ENST00000642089 1582 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CNTN3Q9P232 AL450345.1-202ENST00000605741 3881 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CNTN3Q9P232 AC104623.2-202ENST00000623477 4002 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CNTN3Q9P232 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTN3Q9P232 Z73965.1-201ENST00000623412 2297 ntBASIC5.31□□□□□ -1.56
CNTN3Q9P232 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTN3Q9P232 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
CNTN3Q9P232 FAM91A3P-201ENST00000456826 2544 ntBASIC5.31□□□□□ -1.56
CNTN3Q9P232 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTN3Q9P232 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CNTN3Q9P232 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.31□□□□□ -1.56
CNTN3Q9P232 RNVU1-6-201ENST00000364688 164 ntBASIC5.31□□□□□ -1.56
CNTN3Q9P232 Y_RNA.380-201ENST00000365663 111 ntBASIC5.31□□□□□ -1.56
CNTN3Q9P232 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTN3Q9P232 RNU6-1109P-201ENST00000391187 107 ntBASIC5.31□□□□□ -1.56
CNTN3Q9P232 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CNTN3Q9P232 TBCAP2-201ENST00000416175 326 ntBASIC5.31□□□□□ -1.56
CNTN3Q9P232 AL137014.1-201ENST00000420490 1226 ntBASIC5.31□□□□□ -1.56
CNTN3Q9P232 AC099677.1-201ENST00000420575 175 ntBASIC5.31□□□□□ -1.56
CNTN3Q9P232 AC099799.1-201ENST00000439809 192 ntBASIC5.31□□□□□ -1.56
CNTN3Q9P232 NEFMP1-201ENST00000443423 1006 ntBASIC5.31□□□□□ -1.56
CNTN3Q9P232 HMGB3P30-201ENST00000457863 606 ntBASIC5.31□□□□□ -1.56
CNTN3Q9P232 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.31□□□□□ -1.56
CNTN3Q9P232 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.31□□□□□ -1.56
CNTN3Q9P232 OR7H2P-201ENST00000513483 306 ntBASIC5.31□□□□□ -1.56
CNTN3Q9P232 RNU6-390P-201ENST00000516259 103 ntBASIC5.31□□□□□ -1.56
CNTN3Q9P232 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.31□□□□□ -1.56
CNTN3Q9P232 AC092447.9-201ENST00000603395 144 ntBASIC5.31□□□□□ -1.56
CNTN3Q9P232 AL391358.1-201ENST00000605342 190 ntBASIC5.31□□□□□ -1.56
CNTN3Q9P232 AC018889.1-201ENST00000605372 397 ntBASIC5.31□□□□□ -1.56
CNTN3Q9P232 AC099669.2-201ENST00000616549 437 ntBASIC5.31□□□□□ -1.56
CNTN3Q9P232 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.31□□□□□ -1.56
CNTN3Q9P232 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CNTN3Q9P232 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTN3Q9P232 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTN3Q9P232 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.31□□□□□ -1.56
CNTN3Q9P232 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTN3Q9P232 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTN3Q9P232 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
CNTN3Q9P232 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CNTN3Q9P232 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CNTN3Q9P232 Y_RNA.2-201ENST00000362330 96 ntBASIC5.3□□□□□ -1.56
CNTN3Q9P232 Y_RNA.473-201ENST00000384333 102 ntBASIC5.3□□□□□ -1.56
CNTN3Q9P232 AC110754.1-201ENST00000399740 601 ntBASIC5.3□□□□□ -1.56
CNTN3Q9P232 AL357515.1-201ENST00000402967 542 ntBASIC5.3□□□□□ -1.56
CNTN3Q9P232 RN7SKP100-201ENST00000411258 284 ntBASIC5.3□□□□□ -1.56
CNTN3Q9P232 AC092447.6-201ENST00000414578 210 ntBASIC5.3□□□□□ -1.56
CNTN3Q9P232 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.3□□□□□ -1.56
CNTN3Q9P232 AC104333.2-201ENST00000422630 192 ntBASIC5.3□□□□□ -1.56
CNTN3Q9P232 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.3□□□□□ -1.56
CNTN3Q9P232 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.3□□□□□ -1.56
CNTN3Q9P232 CYCSP34-201ENST00000458172 304 ntBASIC5.3□□□□□ -1.56
CNTN3Q9P232 RPL37P6-201ENST00000460682 294 ntBASIC5.3□□□□□ -1.56
CNTN3Q9P232 AC026979.1-201ENST00000492525 396 ntBASIC5.3□□□□□ -1.56
CNTN3Q9P232 SCARNA16.2-201ENST00000516520 172 ntBASIC5.3□□□□□ -1.56
CNTN3Q9P232 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.3□□□□□ -1.56
CNTN3Q9P232 AC006349.1-201ENST00000555526 235 ntBASIC5.3□□□□□ -1.56
CNTN3Q9P232 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.3□□□□□ -1.56
CNTN3Q9P232 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTN3Q9P232 BMS1P21-201ENST00000634565 365 ntBASIC5.3□□□□□ -1.56
CNTN3Q9P232 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTN3Q9P232 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CNTN3Q9P232 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTN3Q9P232 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
CNTN3Q9P232 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CNTN3Q9P232 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CNTN3Q9P232 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.3□□□□□ -1.56
CNTN3Q9P232 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
CNTN3Q9P232 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.29□□□□□ -1.56
CNTN3Q9P232 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CNTN3Q9P232 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CNTN3Q9P232 AC026951.1-201ENST00000559530 2459 ntBASIC5.29□□□□□ -1.56
CNTN3Q9P232 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CNTN3Q9P232 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CNTN3Q9P232 RNA5SP191-201ENST00000362585 102 ntBASIC5.29□□□□□ -1.56
CNTN3Q9P232 RNU6-379P-201ENST00000363813 104 ntBASIC5.29□□□□□ -1.56
CNTN3Q9P232 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CNTN3Q9P232 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CNTN3Q9P232 Y_RNA.480-201ENST00000384364 102 ntBASIC5.29□□□□□ -1.56
CNTN3Q9P232 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CNTN3Q9P232 RNU2-23P-201ENST00000410545 195 ntBASIC5.29□□□□□ -1.56
CNTN3Q9P232 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.29□□□□□ -1.56
CNTN3Q9P232 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.29□□□□□ -1.56
CNTN3Q9P232 UBE2V1P4-201ENST00000425374 344 ntBASIC5.29□□□□□ -1.56
CNTN3Q9P232 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.29□□□□□ -1.56
CNTN3Q9P232 USP9YP30-201ENST00000430729 455 ntBASIC5.29□□□□□ -1.56
CNTN3Q9P232 RPL23AP50-201ENST00000434149 455 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms