Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 RNU6-222P-201ENST00000362438 107 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 RNA5SP477-201ENST00000362639 119 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 Y_RNA.43-201ENST00000362670 111 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 RNU4-84P-201ENST00000364200 139 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 RNU6-926P-201ENST00000384075 107 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 RNU6-17P-201ENST00000384245 107 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 RNU6-18P-201ENST00000384527 107 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 Y_RNA.570-201ENST00000384750 101 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 Y_RNA.571-201ENST00000384753 98 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 RNU1-139P-201ENST00000391307 165 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 EIF5AP4-201ENST00000441206 465 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 KNOP1P3-201ENST00000446933 426 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 GAPDHP25-201ENST00000447061 1001 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 AC020633.1-201ENST00000468439 2247 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 AC117440.1-201ENST00000474107 571 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 RN7SL193P-201ENST00000491708 276 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 AC104164.2-201ENST00000496953 495 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 SNORD116-25-201ENST00000516517 92 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 AC084851.1-201ENST00000529105 249 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 NDUFB4P11-201ENST00000560510 395 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 MIR3684-201ENST00000579779 74 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 MIR4776-2-201ENST00000580204 80 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 AL133393.1-201ENST00000603277 287 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 uc_338.26-201ENST00000612659 160 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 AL139099.4-201ENST00000614802 114 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 AC022400.9-201ENST00000623633 273 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 IGHVIII-44-202ENST00000636235 289 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 AP002512.4-202ENST00000641599 4530 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 AC022164.1-201ENST00000568767 2673 ntBASIC5.61□□□□□ -1.51
PRDM9Q9NQV7 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 AC009962.1-201ENST00000567327 3813 ntBASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 AC020656.2-201ENST00000613291 5309 ntBASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 SELENOWP1-201ENST00000322792 252 ntBASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 RNU6-834P-201ENST00000362367 110 ntBASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 RNA5SP273-201ENST00000362484 113 ntBASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 Y_RNA.261-201ENST00000364631 102 ntBASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 Y_RNA.446-201ENST00000384178 104 ntBASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 MIR569-201ENST00000385228 96 ntBASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 MIR1282-201ENST00000408865 101 ntBASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 ACA64.1-201ENST00000459171 127 ntBASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 AC108161.1-201ENST00000461060 402 ntBASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 AL122020.1-201ENST00000472287 459 ntBASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 AC012158.1-204ENST00000483430 465 ntBASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 HMGB3P16-201ENST00000508037 287 ntBASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 Y_RNA.667-201ENST00000516212 107 ntBASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 SNORA72.7-201ENST00000516349 94 ntBASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 AC234771.5-201ENST00000600161 514 ntBASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 AC084757.4-201ENST00000616350 526 ntBASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 Y_RNA.778-201ENST00000620203 90 ntBASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 MIR4496-201ENST00000635896 61 ntBASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.6□□□□□ -1.51
PRDM9Q9NQV7 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms