Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RN7SKP60-201ENST00000516985 239 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 RNU6-709P-201ENST00000517257 104 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 AP000827.1-201ENST00000527814 258 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 TOMM20P1-201ENST00000534518 427 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 AC023157.2-201ENST00000540596 141 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.85□□□□□ -1.63
SSU72Q9NP77 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.85□□□□□ -1.63
SSU72Q9NP77 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.85□□□□□ -1.63
SSU72Q9NP77 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.85□□□□□ -1.63
SSU72Q9NP77 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.85□□□□□ -1.63
SSU72Q9NP77 AC012669.1-201ENST00000603209 283 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 AC016727.2-201ENST00000603988 621 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 AC002044.1-201ENST00000606707 158 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 MIR6130-201ENST00000619419 109 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSU72Q9NP77 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SSU72Q9NP77 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSU72Q9NP77 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
SSU72Q9NP77 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.85□□□□□ -1.63
SSU72Q9NP77 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSU72Q9NP77 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SSU72Q9NP77 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SSU72Q9NP77 AC139713.2-215ENST00000641428 5037 ntBASIC4.84□□□□□ -1.63
SSU72Q9NP77 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SSU72Q9NP77 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.84□□□□□ -1.63
SSU72Q9NP77 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSU72Q9NP77 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSU72Q9NP77 MTND5P7-201ENST00000413558 1798 ntBASIC4.84□□□□□ -1.63
SSU72Q9NP77 MTND5P27-201ENST00000428871 1720 ntBASIC4.84□□□□□ -1.63
SSU72Q9NP77 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSU72Q9NP77 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSU72Q9NP77 Y_RNA.151-201ENST00000363566 112 ntBASIC4.84□□□□□ -1.63
SSU72Q9NP77 Y_RNA.210-201ENST00000364161 110 ntBASIC4.84□□□□□ -1.63
SSU72Q9NP77 RNU6-45P-201ENST00000384471 107 ntBASIC4.84□□□□□ -1.63
SSU72Q9NP77 AC110754.1-201ENST00000399740 601 ntBASIC4.84□□□□□ -1.63
SSU72Q9NP77 AC097374.1-203ENST00000400783 485 ntBASIC4.84□□□□□ -1.63
SSU72Q9NP77 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.84□□□□□ -1.63
SSU72Q9NP77 AC099677.1-201ENST00000420575 175 ntBASIC4.84□□□□□ -1.63
SSU72Q9NP77 DDX39BP1-205ENST00000422507 192 ntBASIC4.84□□□□□ -1.63
SSU72Q9NP77 AL391219.1-201ENST00000422570 483 ntBASIC4.84□□□□□ -1.63
SSU72Q9NP77 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.84□□□□□ -1.63
SSU72Q9NP77 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.84□□□□□ -1.63
SSU72Q9NP77 AC011816.1-201ENST00000441346 546 ntBASIC4.84□□□□□ -1.63
SSU72Q9NP77 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.84□□□□□ -1.63
SSU72Q9NP77 AC234775.1-201ENST00000454247 670 ntBASIC4.84□□□□□ -1.63
SSU72Q9NP77 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSU72Q9NP77 RN7SL41P-201ENST00000476144 297 ntBASIC4.84□□□□□ -1.63
SSU72Q9NP77 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.84□□□□□ -1.63
SSU72Q9NP77 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.84□□□□□ -1.63
SSU72Q9NP77 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSU72Q9NP77 AC103783.1-201ENST00000520506 373 ntBASIC4.84□□□□□ -1.63
SSU72Q9NP77 AC022616.4-201ENST00000522985 181 ntBASIC4.84□□□□□ -1.63
SSU72Q9NP77 ERHP1-201ENST00000523006 310 ntBASIC4.84□□□□□ -1.63
SSU72Q9NP77 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.84□□□□□ -1.63
SSU72Q9NP77 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.84□□□□□ -1.63
SSU72Q9NP77 RN7SL176P-201ENST00000580352 264 ntBASIC4.84□□□□□ -1.63
SSU72Q9NP77 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.84□□□□□ -1.63
SSU72Q9NP77 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.84□□□□□ -1.63
SSU72Q9NP77 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.84□□□□□ -1.63
SSU72Q9NP77 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.84□□□□□ -1.63
SSU72Q9NP77 AC105254.2-201ENST00000603636 436 ntBASIC4.84□□□□□ -1.63
SSU72Q9NP77 ELOCP5-201ENST00000604924 333 ntBASIC4.84□□□□□ -1.63
SSU72Q9NP77 AC104695.2-201ENST00000605056 775 ntBASIC4.84□□□□□ -1.63
SSU72Q9NP77 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSU72Q9NP77 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.84□□□□□ -1.63
SSU72Q9NP77 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSU72Q9NP77 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SSU72Q9NP77 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSU72Q9NP77 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSU72Q9NP77 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SSU72Q9NP77 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSU72Q9NP77 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSU72Q9NP77 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SSU72Q9NP77 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
SSU72Q9NP77 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SSU72Q9NP77 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.84□□□□□ -1.64
SSU72Q9NP77 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.84□□□□□ -1.64
SSU72Q9NP77 AL672167.1-205ENST00000641112 3080 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SSU72Q9NP77 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
SSU72Q9NP77 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SSU72Q9NP77 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSU72Q9NP77 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSU72Q9NP77 AC109780.1-201ENST00000451768 1344 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 SNORA17.1-201ENST00000362945 126 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 RNU6-249P-201ENST00000363016 102 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 Y_RNA.222-201ENST00000364264 102 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 RNU6-214P-201ENST00000384130 107 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 Y_RNA.489-201ENST00000384410 101 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSU72Q9NP77 AL080315.1-201ENST00000406055 466 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 MIR1252-201ENST00000408861 65 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 RNU2-64P-201ENST00000411315 191 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 SYF2P2-201ENST00000417620 583 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 OR2AM1P-201ENST00000422137 422 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 Z74021.1-201ENST00000423610 407 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 AL160275.3-201ENST00000423876 471 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.83□□□□□ -1.64
SSU72Q9NP77 MTND2P29-201ENST00000438595 412 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 AC099799.1-201ENST00000439809 192 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms