Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.11□□□□□ -1.91
RNF41Q9H4P4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.11□□□□□ -1.91
RNF41Q9H4P4 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.11□□□□□ -1.91
RNF41Q9H4P4 SUMO2P2-201ENST00000456482 255 ntBASIC3.11□□□□□ -1.91
RNF41Q9H4P4 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.11□□□□□ -1.91
RNF41Q9H4P4 RNU7-136P-201ENST00000458819 69 ntBASIC3.11□□□□□ -1.91
RNF41Q9H4P4 RPL31P50-201ENST00000471002 296 ntBASIC3.11□□□□□ -1.91
RNF41Q9H4P4 VN1R17P-201ENST00000472048 1090 ntBASIC3.11□□□□□ -1.91
RNF41Q9H4P4 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.11□□□□□ -1.91
RNF41Q9H4P4 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.11□□□□□ -1.91
RNF41Q9H4P4 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
RNF41Q9H4P4 AC105185.1-201ENST00000518705 535 ntBASIC3.11□□□□□ -1.91
RNF41Q9H4P4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.11□□□□□ -1.91
RNF41Q9H4P4 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RNF41Q9H4P4 AC087481.2-201ENST00000565492 330 ntBASIC3.11□□□□□ -1.91
RNF41Q9H4P4 HMGB1P6-201ENST00000569046 646 ntBASIC3.11□□□□□ -1.91
RNF41Q9H4P4 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.11□□□□□ -1.91
RNF41Q9H4P4 AC080013.4-201ENST00000607624 649 ntBASIC3.11□□□□□ -1.91
RNF41Q9H4P4 AC245297.2-201ENST00000610119 565 ntBASIC3.11□□□□□ -1.91
RNF41Q9H4P4 SCARNA15.3-201ENST00000626315 122 ntBASIC3.11□□□□□ -1.91
RNF41Q9H4P4 SCARNA4.1-201ENST00000628597 123 ntBASIC3.11□□□□□ -1.91
RNF41Q9H4P4 AC084035.1-201ENST00000634543 607 ntBASIC3.11□□□□□ -1.91
RNF41Q9H4P4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.11□□□□□ -1.91
RNF41Q9H4P4 AP000526.1-201ENST00000603308 1388 ntBASIC3.11□□□□□ -1.91
RNF41Q9H4P4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNF41Q9H4P4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNF41Q9H4P4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RNF41Q9H4P4 AC005539.1-201ENST00000443768 1479 ntBASIC3.1□□□□□ -1.91
RNF41Q9H4P4 AL161431.1-201ENST00000618966 4205 ntBASIC3.1□□□□□ -1.91
RNF41Q9H4P4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.1□□□□□ -1.91
RNF41Q9H4P4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RNF41Q9H4P4 AL049780.3-201ENST00000624612 1583 ntBASIC3.1□□□□□ -1.91
RNF41Q9H4P4 SNORA51.2-201ENST00000364595 132 ntBASIC3.1□□□□□ -1.91
RNF41Q9H4P4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RNF41Q9H4P4 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RNF41Q9H4P4 RNU2-15P-201ENST00000410692 191 ntBASIC3.1□□□□□ -1.91
RNF41Q9H4P4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.1□□□□□ -1.91
RNF41Q9H4P4 RPL7P30-201ENST00000420888 709 ntBASIC3.1□□□□□ -1.91
RNF41Q9H4P4 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.1□□□□□ -1.91
RNF41Q9H4P4 MTND4P6-201ENST00000438297 472 ntBASIC3.1□□□□□ -1.91
RNF41Q9H4P4 AC011816.1-201ENST00000441346 546 ntBASIC3.1□□□□□ -1.91
RNF41Q9H4P4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.1□□□□□ -1.91
RNF41Q9H4P4 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.1□□□□□ -1.91
RNF41Q9H4P4 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.1□□□□□ -1.91
RNF41Q9H4P4 MRPL50P4-201ENST00000446432 475 ntBASIC3.1□□□□□ -1.91
RNF41Q9H4P4 AL109933.2-201ENST00000452651 260 ntBASIC3.1□□□□□ -1.91
RNF41Q9H4P4 RPS24P6-201ENST00000452670 400 ntBASIC3.1□□□□□ -1.91
RNF41Q9H4P4 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.1□□□□□ -1.91
RNF41Q9H4P4 HMGN2P16-201ENST00000456802 261 ntBASIC3.1□□□□□ -1.91
RNF41Q9H4P4 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.1□□□□□ -1.91
RNF41Q9H4P4 RN7SL432P-201ENST00000484057 298 ntBASIC3.1□□□□□ -1.91
RNF41Q9H4P4 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.1□□□□□ -1.91
RNF41Q9H4P4 OR4P1P-201ENST00000530808 1136 ntBASIC3.1□□□□□ -1.91
RNF41Q9H4P4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.1□□□□□ -1.91
RNF41Q9H4P4 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.1□□□□□ -1.91
RNF41Q9H4P4 VN1R82P-201ENST00000601481 356 ntBASIC3.1□□□□□ -1.91
RNF41Q9H4P4 AL133507.1-201ENST00000605269 557 ntBASIC3.1□□□□□ -1.91
RNF41Q9H4P4 AC006270.3-201ENST00000605967 1036 ntBASIC3.1□□□□□ -1.91
RNF41Q9H4P4 AC090425.2-201ENST00000608818 501 ntBASIC3.1□□□□□ -1.91
RNF41Q9H4P4 AC018755.4-201ENST00000619715 454 ntBASIC3.1□□□□□ -1.91
RNF41Q9H4P4 AP002791.1-201ENST00000623291 381 ntBASIC3.1□□□□□ -1.91
RNF41Q9H4P4 AC231657.1-201ENST00000624313 397 ntBASIC3.1□□□□□ -1.91
RNF41Q9H4P4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RNF41Q9H4P4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
RNF41Q9H4P4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RNF41Q9H4P4 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RNF41Q9H4P4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RNF41Q9H4P4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
RNF41Q9H4P4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
RNF41Q9H4P4 AC097714.1-201ENST00000511272 1647 ntBASIC3.09□□□□□ -1.91
RNF41Q9H4P4 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.09□□□□□ -1.91
RNF41Q9H4P4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RNF41Q9H4P4 Y_RNA.510-201ENST00000384511 114 ntBASIC3.09□□□□□ -1.91
RNF41Q9H4P4 MIR196B-201ENST00000384852 84 ntBASIC3.09□□□□□ -1.91
RNF41Q9H4P4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RNF41Q9H4P4 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.09□□□□□ -1.91
RNF41Q9H4P4 RNU6-712P-201ENST00000410558 100 ntBASIC3.09□□□□□ -1.91
RNF41Q9H4P4 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.09□□□□□ -1.91
RNF41Q9H4P4 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.09□□□□□ -1.91
RNF41Q9H4P4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.09□□□□□ -1.91
RNF41Q9H4P4 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.09□□□□□ -1.91
RNF41Q9H4P4 MTCYBP45-201ENST00000435243 565 ntBASIC3.09□□□□□ -1.91
RNF41Q9H4P4 MUPP-201ENST00000438111 566 ntBASIC3.09□□□□□ -1.91
RNF41Q9H4P4 AL591719.1-201ENST00000444669 744 ntBASIC3.09□□□□□ -1.91
RNF41Q9H4P4 EEF1E1P1-201ENST00000446998 430 ntBASIC3.09□□□□□ -1.91
RNF41Q9H4P4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.09□□□□□ -1.91
RNF41Q9H4P4 AC108938.1-201ENST00000451204 136 ntBASIC3.09□□□□□ -1.91
RNF41Q9H4P4 AL353691.1-201ENST00000451332 387 ntBASIC3.09□□□□□ -1.91
RNF41Q9H4P4 MTND2P14-201ENST00000482139 351 ntBASIC3.09□□□□□ -1.91
RNF41Q9H4P4 RN7SL297P-201ENST00000483161 293 ntBASIC3.09□□□□□ -1.91
RNF41Q9H4P4 AC147055.4-201ENST00000504399 745 ntBASIC3.09□□□□□ -1.91
RNF41Q9H4P4 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RNF41Q9H4P4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.09□□□□□ -1.91
RNF41Q9H4P4 AC100870.1-201ENST00000522035 505 ntBASIC3.09□□□□□ -1.91
RNF41Q9H4P4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.09□□□□□ -1.91
RNF41Q9H4P4 AP004371.1-201ENST00000525240 214 ntBASIC3.09□□□□□ -1.91
RNF41Q9H4P4 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.09□□□□□ -1.91
RNF41Q9H4P4 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.09□□□□□ -1.91
RNF41Q9H4P4 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
RNF41Q9H4P4 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms