Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.03□□□□□ -2.08
VCX3BQ9H321 DEFB108D-201ENST00000527787 222 ntBASIC2.03□□□□□ -2.08
VCX3BQ9H321 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.03□□□□□ -2.08
VCX3BQ9H321 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
VCX3BQ9H321 CYCSP2-201ENST00000558168 301 ntBASIC2.03□□□□□ -2.08
VCX3BQ9H321 AC025918.2-201ENST00000558683 763 ntBASIC2.03□□□□□ -2.08
VCX3BQ9H321 ATP5F1P7-201ENST00000567330 760 ntBASIC2.03□□□□□ -2.08
VCX3BQ9H321 AC022069.1-201ENST00000582910 658 ntBASIC2.03□□□□□ -2.08
VCX3BQ9H321 AC016542.1-201ENST00000608259 493 ntBASIC2.03□□□□□ -2.08
VCX3BQ9H321 AC109809.1-201ENST00000619665 545 ntBASIC2.03□□□□□ -2.08
VCX3BQ9H321 AC104820.1-201ENST00000624183 307 ntBASIC2.03□□□□□ -2.08
VCX3BQ9H321 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
VCX3BQ9H321 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
VCX3BQ9H321 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.02□□□□□ -2.09
VCX3BQ9H321 MIR518C-201ENST00000384822 101 ntBASIC2.02□□□□□ -2.09
VCX3BQ9H321 AL035405.1-201ENST00000400795 710 ntBASIC2.02□□□□□ -2.09
VCX3BQ9H321 AL512604.1-201ENST00000404812 257 ntBASIC2.02□□□□□ -2.09
VCX3BQ9H321 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
VCX3BQ9H321 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.02□□□□□ -2.09
VCX3BQ9H321 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.02□□□□□ -2.09
VCX3BQ9H321 AL356867.1-201ENST00000429623 299 ntBASIC2.02□□□□□ -2.09
VCX3BQ9H321 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.02□□□□□ -2.09
VCX3BQ9H321 AC007000.2-201ENST00000442564 487 ntBASIC2.02□□□□□ -2.09
VCX3BQ9H321 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.02□□□□□ -2.09
VCX3BQ9H321 AP000936.2-201ENST00000447151 681 ntBASIC2.02□□□□□ -2.09
VCX3BQ9H321 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.02□□□□□ -2.09
VCX3BQ9H321 AL500527.1-201ENST00000448532 255 ntBASIC2.02□□□□□ -2.09
VCX3BQ9H321 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.02□□□□□ -2.09
VCX3BQ9H321 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.02□□□□□ -2.09
VCX3BQ9H321 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.02□□□□□ -2.09
VCX3BQ9H321 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.02□□□□□ -2.09
VCX3BQ9H321 RPL23AP42-201ENST00000471152 471 ntBASIC2.02□□□□□ -2.09
VCX3BQ9H321 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.02□□□□□ -2.09
VCX3BQ9H321 AC068781.1-201ENST00000488231 618 ntBASIC2.02□□□□□ -2.09
VCX3BQ9H321 RNU5F-8P-201ENST00000515941 111 ntBASIC2.02□□□□□ -2.09
VCX3BQ9H321 RNA5SP200-201ENST00000516360 103 ntBASIC2.02□□□□□ -2.09
VCX3BQ9H321 HIGD1AP6-201ENST00000521833 279 ntBASIC2.02□□□□□ -2.09
VCX3BQ9H321 MTCYBP20-201ENST00000524239 1129 ntBASIC2.02□□□□□ -2.09
VCX3BQ9H321 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.02□□□□□ -2.09
VCX3BQ9H321 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.02□□□□□ -2.09
VCX3BQ9H321 MIR3122-201ENST00000577243 73 ntBASIC2.02□□□□□ -2.09
VCX3BQ9H321 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.02□□□□□ -2.09
VCX3BQ9H321 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.02□□□□□ -2.09
VCX3BQ9H321 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.02□□□□□ -2.09
VCX3BQ9H321 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.02□□□□□ -2.09
VCX3BQ9H321 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.02□□□□□ -2.09
VCX3BQ9H321 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
VCX3BQ9H321 AC103710.2-202ENST00000641454 2853 ntBASIC2.02□□□□□ -2.09
VCX3BQ9H321 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.02□□□□□ -2.09
VCX3BQ9H321 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VCX3BQ9H321 Z99496.1-201ENST00000469424 1477 ntBASIC2.01□□□□□ -2.09
VCX3BQ9H321 AC004520.1-201ENST00000608362 1413 ntBASIC2.01□□□□□ -2.09
VCX3BQ9H321 MTND5P31-201ENST00000419366 1374 ntBASIC2.01□□□□□ -2.09
VCX3BQ9H321 RNA5SP515-201ENST00000364570 118 ntBASIC2.01□□□□□ -2.09
VCX3BQ9H321 RNU6-921P-201ENST00000384361 107 ntBASIC2.01□□□□□ -2.09
VCX3BQ9H321 RNU6-796P-201ENST00000391086 107 ntBASIC2.01□□□□□ -2.09
VCX3BQ9H321 PTMAP2-201ENST00000397627 327 ntBASIC2.01□□□□□ -2.09
VCX3BQ9H321 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.01□□□□□ -2.09
VCX3BQ9H321 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.01□□□□□ -2.09
VCX3BQ9H321 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VCX3BQ9H321 TRIM60P13-201ENST00000432350 1283 ntBASIC2.01□□□□□ -2.09
VCX3BQ9H321 HMGN3P1-201ENST00000453847 193 ntBASIC2.01□□□□□ -2.09
VCX3BQ9H321 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.01□□□□□ -2.09
VCX3BQ9H321 MTCO1P42-201ENST00000457379 726 ntBASIC2.01□□□□□ -2.09
VCX3BQ9H321 AP001992.1-205ENST00000462248 379 ntBASIC2.01□□□□□ -2.09
VCX3BQ9H321 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.01□□□□□ -2.09
VCX3BQ9H321 OR4G11P-201ENST00000492842 939 ntBASIC2.01□□□□□ -2.09
VCX3BQ9H321 SUMO2P6-201ENST00000505273 288 ntBASIC2.01□□□□□ -2.09
VCX3BQ9H321 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.01□□□□□ -2.09
VCX3BQ9H321 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.01□□□□□ -2.09
VCX3BQ9H321 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.01□□□□□ -2.09
VCX3BQ9H321 OR8K4P-201ENST00000534608 872 ntBASIC2.01□□□□□ -2.09
VCX3BQ9H321 AC022080.3-201ENST00000544433 482 ntBASIC2.01□□□□□ -2.09
VCX3BQ9H321 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.01□□□□□ -2.09
VCX3BQ9H321 AC004217.3-201ENST00000551552 878 ntBASIC2.01□□□□□ -2.09
VCX3BQ9H321 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VCX3BQ9H321 AC233266.2-201ENST00000567067 528 ntBASIC2.01□□□□□ -2.09
VCX3BQ9H321 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.01□□□□□ -2.09
VCX3BQ9H321 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.01□□□□□ -2.09
VCX3BQ9H321 VN1R88P-201ENST00000596787 292 ntBASIC2.01□□□□□ -2.09
VCX3BQ9H321 AC007619.2-201ENST00000605743 379 ntBASIC2.01□□□□□ -2.09
VCX3BQ9H321 AC021851.1-201ENST00000608537 1082 ntBASIC2.01□□□□□ -2.09
VCX3BQ9H321 AP001033.2-201ENST00000609701 1003 ntBASIC2.01□□□□□ -2.09
VCX3BQ9H321 AC093838.1-201ENST00000613014 469 ntBASIC2.01□□□□□ -2.09
VCX3BQ9H321 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.01□□□□□ -2.09
VCX3BQ9H321 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.01□□□□□ -2.09
VCX3BQ9H321 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.01□□□□□ -2.09
VCX3BQ9H321 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
VCX3BQ9H321 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VCX3BQ9H321 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2□□□□□ -2.09
VCX3BQ9H321 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2□□□□□ -2.09
VCX3BQ9H321 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2□□□□□ -2.09
VCX3BQ9H321 RNA5SP72-201ENST00000364442 117 ntBASIC2□□□□□ -2.09
VCX3BQ9H321 RNU6-1328P-201ENST00000410938 106 ntBASIC2□□□□□ -2.09
VCX3BQ9H321 AIMP1P2-201ENST00000425294 312 ntBASIC2□□□□□ -2.09
VCX3BQ9H321 RPP40P1-201ENST00000426762 456 ntBASIC2□□□□□ -2.09
VCX3BQ9H321 AC093422.3-201ENST00000428506 305 ntBASIC2□□□□□ -2.09
VCX3BQ9H321 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC2□□□□□ -2.09
VCX3BQ9H321 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2□□□□□ -2.09
VCX3BQ9H321 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms