Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AL117339.4-201ENST00000608335 7063 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AC091152.2-201ENST00000591628 2569 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AC123769.1-201ENST00000530992 3192 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 MIR133B-201ENST00000362210 119 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU1-72P-201ENST00000362976 153 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-527P-201ENST00000363425 104 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 U3.8-201ENST00000363675 217 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 RNA5SP335-201ENST00000363817 110 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 RNA5SP125-201ENST00000364843 120 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-438P-201ENST00000365561 103 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 CDC123-202ENST00000378900 933 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 SNORA20B-201ENST00000384220 132 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU1-106P-201ENST00000384382 164 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 SNORD78.2-201ENST00000391076 69 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 SNORA75.5-201ENST00000391291 81 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AC009804.1-201ENST00000400949 179 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AL117342.1-201ENST00000404861 406 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU2-54P-201ENST00000410299 190 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-402P-201ENST00000410678 103 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 RPL7AP25-201ENST00000423357 805 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AC113412.1-201ENST00000425840 504 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AL590762.4-201ENST00000425885 253 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 MED13P1-201ENST00000428342 171 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 YME1L1P1-201ENST00000429435 297 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AC016712.1-201ENST00000431088 378 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 RPL35AP22-201ENST00000436855 335 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 SCARNA18-201ENST00000459004 134 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 RN7SL222P-201ENST00000476452 299 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AC084198.1-201ENST00000477747 402 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 RN7SL570P-201ENST00000484405 292 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 GLUD1P3-202ENST00000508551 200 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AC006499.2-201ENST00000513470 337 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-1114P-201ENST00000516022 107 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-1006P-201ENST00000516998 103 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 SNRPGP16-201ENST00000533275 226 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AP004607.2-201ENST00000533949 322 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 IGBP1P1-201ENST00000554337 1009 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 MIR4659A-201ENST00000580269 81 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 MIR4273-201ENST00000582824 84 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AC008507.4-201ENST00000585464 127 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 U2.17-201ENST00000611454 95 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 AC099669.2-201ENST00000616549 437 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 FP236240.3-201ENST00000623061 327 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 CYP4F35P-202ENST00000636121 390 ntBASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 FER-202ENST00000438717 1531 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-3Q9BYR4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms