Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 AC104090.1-201ENST00000506341 1171 ntBASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 AC034244.1-201ENST00000507687 207 ntBASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 RNU5A-4P-201ENST00000516588 111 ntBASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 AC022690.1-201ENST00000526681 550 ntBASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 UBTFL10-201ENST00000528532 562 ntBASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 OR7K1P-201ENST00000546439 926 ntBASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 NBEAP1-201ENST00000554452 979 ntBASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 MTCO3P13-201ENST00000577757 781 ntBASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 MIR4635-201ENST00000583759 79 ntBASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 AP001029.3-201ENST00000588063 596 ntBASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 AC021749.1-201ENST00000604322 607 ntBASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RSPO3Q9BXY4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 AC006378.2-201ENST00000623178 2476 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 HMGB1P5-201ENST00000255320 642 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 RNU6-799P-201ENST00000363567 107 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 SNORD56.5-201ENST00000364281 72 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 Y_RNA.465-201ENST00000384293 102 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 RNU6-1300P-201ENST00000391046 108 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 AC119751.3-201ENST00000399720 670 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 RNU2-42P-201ENST00000410697 113 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 USP9YP20-201ENST00000419224 558 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 MTND1P32-201ENST00000433043 938 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 USP9YP22-201ENST00000438971 294 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 AC011816.1-201ENST00000441346 546 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 RPS29P12-201ENST00000460178 152 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 AC004263.1-201ENST00000479327 332 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 VPS26AP1-201ENST00000483197 979 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 MTCYBP16-201ENST00000509187 1129 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 HSPE1P23-201ENST00000509838 286 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 AC116353.3-201ENST00000511215 249 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 AC016065.2-201ENST00000514530 444 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 RNA5SP367-201ENST00000516557 118 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 AP001317.1-201ENST00000531194 960 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 AL132657.2-201ENST00000564417 358 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 BNIP3P26-201ENST00000600827 554 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 AC103881.1-201ENST00000603476 538 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 AC009220.3-201ENST00000604318 586 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 AC069545.1-201ENST00000605671 358 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 AP000484.1-201ENST00000620067 1252 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 AP002782.1-201ENST00000623107 614 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 AP000676.3-201ENST00000623299 569 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 MTND2P41-201ENST00000637599 773 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 MIR1322-201ENST00000638013 71 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 MAPK10-266ENST00000641066 6555 ntBASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
RSPO3Q9BXY4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.41□□□□□ -2.02
RSPO3Q9BXY4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
RSPO3Q9BXY4 AP000776.1-201ENST00000530032 1663 ntBASIC2.41□□□□□ -2.02
RSPO3Q9BXY4 AC138915.1-201ENST00000565427 1685 ntBASIC2.41□□□□□ -2.02
RSPO3Q9BXY4 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
RSPO3Q9BXY4 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RSPO3Q9BXY4 MTND4LP20-201ENST00000402379 270 ntBASIC2.41□□□□□ -2.02
RSPO3Q9BXY4 RNA5SP184-201ENST00000411071 108 ntBASIC2.41□□□□□ -2.02
RSPO3Q9BXY4 AC068533.2-201ENST00000411872 306 ntBASIC2.41□□□□□ -2.02
RSPO3Q9BXY4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.41□□□□□ -2.02
RSPO3Q9BXY4 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.41□□□□□ -2.02
RSPO3Q9BXY4 AC107081.1-201ENST00000414975 361 ntBASIC2.41□□□□□ -2.02
RSPO3Q9BXY4 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.41□□□□□ -2.02
RSPO3Q9BXY4 MRPS36P1-201ENST00000421291 307 ntBASIC2.41□□□□□ -2.02
RSPO3Q9BXY4 DPRXP1-201ENST00000426312 460 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms