Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SMOQ99835 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.14□□□□□ -1.75
SMOQ99835 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.13□□□□□ -1.75
SMOQ99835 RNU6-223P-201ENST00000362830 107 ntBASIC4.13□□□□□ -1.75
SMOQ99835 Y_RNA.86-201ENST00000363020 111 ntBASIC4.13□□□□□ -1.75
SMOQ99835 RNU1-64P-201ENST00000365443 163 ntBASIC4.13□□□□□ -1.75
SMOQ99835 RNU6-278P-201ENST00000390945 109 ntBASIC4.13□□□□□ -1.75
SMOQ99835 RN7SKP27-201ENST00000410684 333 ntBASIC4.13□□□□□ -1.75
SMOQ99835 RNU6-516P-201ENST00000411381 104 ntBASIC4.13□□□□□ -1.75
SMOQ99835 SDCBPP3-201ENST00000419629 891 ntBASIC4.13□□□□□ -1.75
SMOQ99835 HMGB1P37-201ENST00000439613 609 ntBASIC4.13□□□□□ -1.75
SMOQ99835 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.13□□□□□ -1.75
SMOQ99835 RANP8-201ENST00000444720 713 ntBASIC4.13□□□□□ -1.75
SMOQ99835 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.13□□□□□ -1.75
SMOQ99835 RNU7-63P-201ENST00000459054 62 ntBASIC4.13□□□□□ -1.75
SMOQ99835 snoU13.3-201ENST00000459441 104 ntBASIC4.13□□□□□ -1.75
SMOQ99835 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
SMOQ99835 AC135721.1-201ENST00000497954 479 ntBASIC4.13□□□□□ -1.75
SMOQ99835 PCBP2P3-201ENST00000509726 843 ntBASIC4.13□□□□□ -1.75
SMOQ99835 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.13□□□□□ -1.75
SMOQ99835 RNU6-64P-201ENST00000517119 105 ntBASIC4.13□□□□□ -1.75
SMOQ99835 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.13□□□□□ -1.75
SMOQ99835 DEFB109D-201ENST00000529497 240 ntBASIC4.13□□□□□ -1.75
SMOQ99835 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.13□□□□□ -1.75
SMOQ99835 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.13□□□□□ -1.75
SMOQ99835 GNRHR2P1-201ENST00000555315 631 ntBASIC4.13□□□□□ -1.75
SMOQ99835 RPL21P12-201ENST00000559810 515 ntBASIC4.13□□□□□ -1.75
SMOQ99835 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.13□□□□□ -1.75
SMOQ99835 UBE2V2P2-201ENST00000587677 504 ntBASIC4.13□□□□□ -1.75
SMOQ99835 AC093227.2-201ENST00000589357 285 ntBASIC4.13□□□□□ -1.75
SMOQ99835 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.13□□□□□ -1.75
SMOQ99835 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.13□□□□□ -1.75
SMOQ99835 AC012669.1-201ENST00000603209 283 ntBASIC4.13□□□□□ -1.75
SMOQ99835 AL031176.1-201ENST00000604554 466 ntBASIC4.13□□□□□ -1.75
SMOQ99835 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.13□□□□□ -1.75
SMOQ99835 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.13□□□□□ -1.75
SMOQ99835 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SMOQ99835 AL354950.2-201ENST00000617939 290 ntBASIC4.13□□□□□ -1.75
SMOQ99835 AC006504.8-201ENST00000621046 635 ntBASIC4.13□□□□□ -1.75
SMOQ99835 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.13□□□□□ -1.75
SMOQ99835 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.13□□□□□ -1.75
SMOQ99835 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SMOQ99835 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SMOQ99835 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SMOQ99835 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SMOQ99835 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMOQ99835 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.12□□□□□ -1.75
SMOQ99835 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMOQ99835 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.12□□□□□ -1.75
SMOQ99835 AC006020.1-201ENST00000420179 1854 ntBASIC4.12□□□□□ -1.75
SMOQ99835 RNA5SP502-201ENST00000362694 119 ntBASIC4.12□□□□□ -1.75
SMOQ99835 Y_RNA.279-201ENST00000364763 95 ntBASIC4.12□□□□□ -1.75
SMOQ99835 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMOQ99835 MIR134-201ENST00000385258 73 ntBASIC4.12□□□□□ -1.75
SMOQ99835 AL354719.1-201ENST00000406535 843 ntBASIC4.12□□□□□ -1.75
SMOQ99835 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMOQ99835 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.12□□□□□ -1.75
SMOQ99835 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.12□□□□□ -1.75
SMOQ99835 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.12□□□□□ -1.75
SMOQ99835 SNRPGP6-201ENST00000451124 220 ntBASIC4.12□□□□□ -1.75
SMOQ99835 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.12□□□□□ -1.75
SMOQ99835 PMCHL2-203ENST00000457791 237 ntBASIC4.12□□□□□ -1.75
SMOQ99835 RPS20P20-201ENST00000460498 340 ntBASIC4.12□□□□□ -1.75
SMOQ99835 RN7SL323P-201ENST00000494712 295 ntBASIC4.12□□□□□ -1.75
SMOQ99835 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SMOQ99835 AC139783.2-201ENST00000504847 1145 ntBASIC4.12□□□□□ -1.75
SMOQ99835 SNORD27.1-201ENST00000516319 72 ntBASIC4.12□□□□□ -1.75
SMOQ99835 AC011979.2-201ENST00000527568 352 ntBASIC4.12□□□□□ -1.75
SMOQ99835 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.12□□□□□ -1.75
SMOQ99835 RAB11AP2-201ENST00000545905 639 ntBASIC4.12□□□□□ -1.75
SMOQ99835 ARL2BPP2-201ENST00000550907 489 ntBASIC4.12□□□□□ -1.75
SMOQ99835 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.12□□□□□ -1.75
SMOQ99835 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.12□□□□□ -1.75
SMOQ99835 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.12□□□□□ -1.75
SMOQ99835 MIR4293-201ENST00000584305 78 ntBASIC4.12□□□□□ -1.75
SMOQ99835 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.12□□□□□ -1.75
SMOQ99835 AC010680.4-201ENST00000605334 543 ntBASIC4.12□□□□□ -1.75
SMOQ99835 BNIP3P10-201ENST00000605360 577 ntBASIC4.12□□□□□ -1.75
SMOQ99835 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.12□□□□□ -1.75
SMOQ99835 AC099669.2-201ENST00000616549 437 ntBASIC4.12□□□□□ -1.75
SMOQ99835 AL161637.1-201ENST00000622380 412 ntBASIC4.12□□□□□ -1.75
SMOQ99835 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
SMOQ99835 AC099654.5-201ENST00000636479 350 ntBASIC4.12□□□□□ -1.75
SMOQ99835 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMOQ99835 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SMOQ99835 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMOQ99835 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SMOQ99835 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMOQ99835 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SMOQ99835 AL139811.1-201ENST00000424779 2299 ntBASIC4.11□□□□□ -1.75
SMOQ99835 MTCO1P9-201ENST00000505577 1534 ntBASIC4.11□□□□□ -1.75
SMOQ99835 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.11□□□□□ -1.75
SMOQ99835 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.11□□□□□ -1.75
SMOQ99835 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SMOQ99835 RPL7P26-201ENST00000333817 754 ntBASIC4.11□□□□□ -1.75
SMOQ99835 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SMOQ99835 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.11□□□□□ -1.75
SMOQ99835 MIR30B-201ENST00000384850 88 ntBASIC4.11□□□□□ -1.75
SMOQ99835 MIR558-201ENST00000384920 94 ntBASIC4.11□□□□□ -1.75
SMOQ99835 RNU2-36P-201ENST00000410361 191 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms