Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PHOX2BQ99453 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
PHOX2BQ99453 AC024651.2-201ENST00000562480 2098 ntBASIC5.95□□□□□ -1.46
PHOX2BQ99453 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PHOX2BQ99453 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PHOX2BQ99453 SRRM1P3-201ENST00000426911 2678 ntBASIC5.95□□□□□ -1.46
PHOX2BQ99453 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
PHOX2BQ99453 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PHOX2BQ99453 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.95□□□□□ -1.46
PHOX2BQ99453 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PHOX2BQ99453 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PHOX2BQ99453 DEFB108F-201ENST00000344638 222 ntBASIC5.95□□□□□ -1.46
PHOX2BQ99453 RNA5SP183-201ENST00000362452 119 ntBASIC5.95□□□□□ -1.46
PHOX2BQ99453 Y_RNA.76-201ENST00000362931 109 ntBASIC5.95□□□□□ -1.46
PHOX2BQ99453 Y_RNA.123-201ENST00000363338 102 ntBASIC5.95□□□□□ -1.46
PHOX2BQ99453 Y_RNA.504-201ENST00000384481 104 ntBASIC5.95□□□□□ -1.46
PHOX2BQ99453 MIR153-1-201ENST00000384914 90 ntBASIC5.95□□□□□ -1.46
PHOX2BQ99453 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PHOX2BQ99453 BTF3L4P2-201ENST00000392798 346 ntBASIC5.95□□□□□ -1.46
PHOX2BQ99453 RPS16P5-201ENST00000406501 404 ntBASIC5.95□□□□□ -1.46
PHOX2BQ99453 TPT1P12-201ENST00000448968 492 ntBASIC5.95□□□□□ -1.46
PHOX2BQ99453 snoU13.30-201ENST00000458951 104 ntBASIC5.95□□□□□ -1.46
PHOX2BQ99453 RPS20P22-201ENST00000473700 357 ntBASIC5.95□□□□□ -1.46
PHOX2BQ99453 AC012123.2-201ENST00000485809 248 ntBASIC5.95□□□□□ -1.46
PHOX2BQ99453 RNU2-31P-201ENST00000516954 155 ntBASIC5.95□□□□□ -1.46
PHOX2BQ99453 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.95□□□□□ -1.46
PHOX2BQ99453 AC021006.3-201ENST00000530771 192 ntBASIC5.95□□□□□ -1.46
PHOX2BQ99453 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.95□□□□□ -1.46
PHOX2BQ99453 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.95□□□□□ -1.46
PHOX2BQ99453 RPL21P7-201ENST00000557463 483 ntBASIC5.95□□□□□ -1.46
PHOX2BQ99453 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.95□□□□□ -1.46
PHOX2BQ99453 AC023575.1-201ENST00000580510 358 ntBASIC5.95□□□□□ -1.46
PHOX2BQ99453 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.95□□□□□ -1.46
PHOX2BQ99453 AL359854.1-201ENST00000614203 1594 ntBASIC5.95□□□□□ -1.46
PHOX2BQ99453 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.95□□□□□ -1.46
PHOX2BQ99453 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PHOX2BQ99453 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PHOX2BQ99453 AC083837.1-201ENST00000565297 2994 ntBASIC5.95□□□□□ -1.46
PHOX2BQ99453 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
PHOX2BQ99453 STX3-208ENST00000641815 3236 ntBASIC5.95□□□□□ -1.46
PHOX2BQ99453 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PHOX2BQ99453 AC090971.4-201ENST00000560291 1800 ntBASIC5.95□□□□□ -1.46
PHOX2BQ99453 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PHOX2BQ99453 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PHOX2BQ99453 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PHOX2BQ99453 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PHOX2BQ99453 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PHOX2BQ99453 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.94□□□□□ -1.46
PHOX2BQ99453 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.94□□□□□ -1.46
PHOX2BQ99453 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
PHOX2BQ99453 ZNF826P-207ENST00000622273 1910 ntBASIC5.94□□□□□ -1.46
PHOX2BQ99453 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PHOX2BQ99453 AC097063.1-201ENST00000426714 1797 ntBASIC5.94□□□□□ -1.46
PHOX2BQ99453 RNU6-858P-201ENST00000362436 107 ntBASIC5.94□□□□□ -1.46
PHOX2BQ99453 Y_RNA.170-201ENST00000363746 110 ntBASIC5.94□□□□□ -1.46
PHOX2BQ99453 SNORD8-201ENST00000363915 110 ntBASIC5.94□□□□□ -1.46
PHOX2BQ99453 Y_RNA.304-201ENST00000365011 112 ntBASIC5.94□□□□□ -1.46
PHOX2BQ99453 SNORA62-201ENST00000365493 153 ntBASIC5.94□□□□□ -1.46
PHOX2BQ99453 MIR10A-201ENST00000385043 110 ntBASIC5.94□□□□□ -1.46
PHOX2BQ99453 RNU11-201ENST00000387069 134 ntBASIC5.94□□□□□ -1.46
PHOX2BQ99453 AC245028.1-201ENST00000423259 256 ntBASIC5.94□□□□□ -1.46
PHOX2BQ99453 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.94□□□□□ -1.46
PHOX2BQ99453 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC5.94□□□□□ -1.46
PHOX2BQ99453 FABP5P15-201ENST00000453566 214 ntBASIC5.94□□□□□ -1.46
PHOX2BQ99453 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.94□□□□□ -1.46
PHOX2BQ99453 BX284632.1-201ENST00000478218 541 ntBASIC5.94□□□□□ -1.46
PHOX2BQ99453 AL160314.1-201ENST00000490836 438 ntBASIC5.94□□□□□ -1.46
PHOX2BQ99453 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.94□□□□□ -1.46
PHOX2BQ99453 IGBP1P1-201ENST00000554337 1009 ntBASIC5.94□□□□□ -1.46
PHOX2BQ99453 AC023824.2-201ENST00000566185 400 ntBASIC5.94□□□□□ -1.46
PHOX2BQ99453 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.94□□□□□ -1.46
PHOX2BQ99453 AL360012.1-201ENST00000602813 131 ntBASIC5.94□□□□□ -1.46
PHOX2BQ99453 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.94□□□□□ -1.46
PHOX2BQ99453 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.94□□□□□ -1.46
PHOX2BQ99453 MIR6758-201ENST00000620653 63 ntBASIC5.94□□□□□ -1.46
PHOX2BQ99453 AL360181.4-201ENST00000621752 134 ntBASIC5.94□□□□□ -1.46
PHOX2BQ99453 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PHOX2BQ99453 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PHOX2BQ99453 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PHOX2BQ99453 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.94□□□□□ -1.46
PHOX2BQ99453 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PHOX2BQ99453 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.94□□□□□ -1.46
PHOX2BQ99453 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.94□□□□□ -1.46
PHOX2BQ99453 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
PHOX2BQ99453 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
PHOX2BQ99453 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PHOX2BQ99453 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
PHOX2BQ99453 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PHOX2BQ99453 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.93□□□□□ -1.46
PHOX2BQ99453 AC114774.1-201ENST00000507410 1770 ntBASIC5.93□□□□□ -1.46
PHOX2BQ99453 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.93□□□□□ -1.46
PHOX2BQ99453 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PHOX2BQ99453 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PHOX2BQ99453 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.93□□□□□ -1.46
PHOX2BQ99453 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PHOX2BQ99453 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.93□□□□□ -1.46
PHOX2BQ99453 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PHOX2BQ99453 RNU1-59P-201ENST00000364829 162 ntBASIC5.93□□□□□ -1.46
PHOX2BQ99453 Y_RNA.292-201ENST00000364904 97 ntBASIC5.93□□□□□ -1.46
PHOX2BQ99453 MIR514A1-201ENST00000385133 98 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms