Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 ZNF92P3-201ENST00000596594 954 ntBASIC2.05□□□□□ -2.08
CDK5RAP2Q96SN8 AC013444.2-201ENST00000603317 787 ntBASIC2.05□□□□□ -2.08
CDK5RAP2Q96SN8 AC005021.1-201ENST00000608730 355 ntBASIC2.05□□□□□ -2.08
CDK5RAP2Q96SN8 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.05□□□□□ -2.08
CDK5RAP2Q96SN8 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CDK5RAP2Q96SN8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CDK5RAP2Q96SN8 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CDK5RAP2Q96SN8 SET-203ENST00000372688 801 ntTSL 2 BASIC2.04□□□□□ -2.08
CDK5RAP2Q96SN8 RPL23AP58-201ENST00000440453 469 ntBASIC2.04□□□□□ -2.08
CDK5RAP2Q96SN8 USP9YP10-201ENST00000454868 628 ntBASIC2.04□□□□□ -2.08
CDK5RAP2Q96SN8 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.04□□□□□ -2.08
CDK5RAP2Q96SN8 HMGB1P22-201ENST00000505315 124 ntBASIC2.04□□□□□ -2.08
CDK5RAP2Q96SN8 AC108078.2-201ENST00000510750 236 ntBASIC2.04□□□□□ -2.08
CDK5RAP2Q96SN8 OR5BM1P-201ENST00000512021 366 ntBASIC2.04□□□□□ -2.08
CDK5RAP2Q96SN8 SNORA25.15-201ENST00000516487 89 ntBASIC2.04□□□□□ -2.08
CDK5RAP2Q96SN8 snoZ278.1-201ENST00000517059 112 ntBASIC2.04□□□□□ -2.08
CDK5RAP2Q96SN8 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CDK5RAP2Q96SN8 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CDK5RAP2Q96SN8 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.04□□□□□ -2.08
CDK5RAP2Q96SN8 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.04□□□□□ -2.08
CDK5RAP2Q96SN8 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.04□□□□□ -2.08
CDK5RAP2Q96SN8 MIR203B-201ENST00000636080 86 ntBASIC2.04□□□□□ -2.08
CDK5RAP2Q96SN8 RNU4-13P-201ENST00000364019 141 ntBASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 RNU6-1293P-201ENST00000384077 107 ntBASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 MIR518E-201ENST00000385252 88 ntBASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 SFR1P1-201ENST00000403720 688 ntBASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 BTF3P4-201ENST00000418852 495 ntBASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 MTCO3P4-201ENST00000419236 787 ntBASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 AL606495.1-201ENST00000422100 813 ntBASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 HMGB1P31-201ENST00000437242 427 ntBASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 AC023512.1-201ENST00000444513 499 ntBASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 TAF9P1-201ENST00000445421 515 ntBASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 TAF9P2-201ENST00000454958 515 ntBASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 snoU13.3-201ENST00000459441 104 ntBASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 AC104629.2-201ENST00000468627 598 ntBASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 RPL30P14-201ENST00000482744 348 ntBASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 AC140059.1-201ENST00000489238 361 ntBASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 RNU6-1004P-201ENST00000516584 111 ntBASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 AL035411.2-201ENST00000604022 421 ntBASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 MIR6895-201ENST00000613497 78 ntBASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 AC018755.4-201ENST00000619715 454 ntBASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 RNU6-156P-201ENST00000621869 107 ntBASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 AC004520.1-201ENST00000608362 1413 ntBASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.03□□□□□ -2.08
CDK5RAP2Q96SN8 Y_RNA.40-201ENST00000362645 93 ntBASIC2.03□□□□□ -2.09
CDK5RAP2Q96SN8 RPS15AP40-201ENST00000419621 391 ntBASIC2.03□□□□□ -2.09
CDK5RAP2Q96SN8 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.03□□□□□ -2.09
CDK5RAP2Q96SN8 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.03□□□□□ -2.09
CDK5RAP2Q96SN8 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.03□□□□□ -2.09
CDK5RAP2Q96SN8 MTND2P26-201ENST00000528255 1029 ntBASIC2.03□□□□□ -2.09
CDK5RAP2Q96SN8 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.03□□□□□ -2.09
CDK5RAP2Q96SN8 APOOP1-201ENST00000604695 592 ntBASIC2.03□□□□□ -2.09
CDK5RAP2Q96SN8 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.02□□□□□ -2.09
CDK5RAP2Q96SN8 MIR337-201ENST00000362281 93 ntBASIC2.02□□□□□ -2.09
CDK5RAP2Q96SN8 FGF7P8-201ENST00000402994 292 ntBASIC2.02□□□□□ -2.09
CDK5RAP2Q96SN8 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.02□□□□□ -2.09
CDK5RAP2Q96SN8 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.02□□□□□ -2.09
CDK5RAP2Q96SN8 SNRPGP9-201ENST00000456025 225 ntBASIC2.02□□□□□ -2.09
CDK5RAP2Q96SN8 RPL23AP41-201ENST00000484754 458 ntBASIC2.02□□□□□ -2.09
CDK5RAP2Q96SN8 AC005840.1-201ENST00000498412 377 ntBASIC2.02□□□□□ -2.09
CDK5RAP2Q96SN8 RAC1P5-201ENST00000512182 576 ntBASIC2.02□□□□□ -2.09
CDK5RAP2Q96SN8 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.02□□□□□ -2.09
CDK5RAP2Q96SN8 AC117532.1-201ENST00000514638 323 ntBASIC2.02□□□□□ -2.09
CDK5RAP2Q96SN8 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.02□□□□□ -2.09
CDK5RAP2Q96SN8 AP003385.6-201ENST00000531603 374 ntBASIC2.02□□□□□ -2.09
CDK5RAP2Q96SN8 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.02□□□□□ -2.09
CDK5RAP2Q96SN8 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.02□□□□□ -2.09
CDK5RAP2Q96SN8 AL009028.1-201ENST00000604895 802 ntBASIC2.02□□□□□ -2.09
CDK5RAP2Q96SN8 AC010872.1-201ENST00000624225 675 ntBASIC2.02□□□□□ -2.09
CDK5RAP2Q96SN8 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.02□□□□□ -2.09
CDK5RAP2Q96SN8 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
CDK5RAP2Q96SN8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CDK5RAP2Q96SN8 RNU6-661P-201ENST00000362409 107 ntBASIC2.01□□□□□ -2.09
CDK5RAP2Q96SN8 HMGN2P38-201ENST00000423806 265 ntBASIC2.01□□□□□ -2.09
CDK5RAP2Q96SN8 UBBP3-201ENST00000445497 241 ntBASIC2.01□□□□□ -2.09
CDK5RAP2Q96SN8 SETP11-201ENST00000473027 690 ntBASIC2.01□□□□□ -2.09
CDK5RAP2Q96SN8 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.01□□□□□ -2.09
CDK5RAP2Q96SN8 MLLT10P2-201ENST00000506434 249 ntBASIC2.01□□□□□ -2.09
CDK5RAP2Q96SN8 AC021146.7-201ENST00000509604 775 ntBASIC2.01□□□□□ -2.09
CDK5RAP2Q96SN8 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.01□□□□□ -2.09
CDK5RAP2Q96SN8 CIR1P1-201ENST00000524055 1133 ntBASIC2.01□□□□□ -2.09
CDK5RAP2Q96SN8 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
CDK5RAP2Q96SN8 MIR502-201ENST00000606349 86 ntBASIC2.01□□□□□ -2.09
CDK5RAP2Q96SN8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.01□□□□□ -2.09
CDK5RAP2Q96SN8 SNORA25.9-201ENST00000365087 128 ntBASIC2.01□□□□□ -2.09
CDK5RAP2Q96SN8 SNORA1.3-201ENST00000384676 136 ntBASIC2.01□□□□□ -2.09
CDK5RAP2Q96SN8 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.01□□□□□ -2.09
CDK5RAP2Q96SN8 CDC42P1-201ENST00000456658 548 ntBASIC2.01□□□□□ -2.09
CDK5RAP2Q96SN8 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.01□□□□□ -2.09
CDK5RAP2Q96SN8 RPPH1-2P-201ENST00000516688 293 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms