Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 MIR199A2-201ENST00000385289 110 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 RPS26P8-201ENST00000393490 348 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AL354719.1-201ENST00000406535 843 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 RNU2-33P-201ENST00000410344 192 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 RNU6-248P-201ENST00000410720 107 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 ZNF90P2-204ENST00000419323 1075 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 RPL17P36-201ENST00000420302 549 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AC009480.2-201ENST00000422916 432 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AL512844.2-201ENST00000433990 593 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AC009961.2-201ENST00000435771 251 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 RPS4XP4-201ENST00000443195 763 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 KATNBL1P3-201ENST00000443475 909 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 GAPDHP17-201ENST00000449858 1001 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AC006480.1-201ENST00000449887 378 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AC013267.1-201ENST00000458227 267 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 snoU13.1-201ENST00000459157 104 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AC087588.1-201ENST00000462203 316 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AP002884.2-201ENST00000471647 395 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AC023598.1-201ENST00000472521 361 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 RAP1BP2-201ENST00000478270 544 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AC111000.3-201ENST00000508057 576 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 RPS3AP4-201ENST00000555161 764 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 KLKP1-201ENST00000595979 403 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AL670379.6-201ENST00000603753 252 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AL670379.11-201ENST00000604059 253 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AC008162.1-201ENST00000604718 254 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AL670379.1-201ENST00000604752 252 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AC090578.1-201ENST00000604955 591 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AL670379.5-201ENST00000605253 252 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AL670379.12-201ENST00000605291 253 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AL670379.8-201ENST00000605353 252 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AL670379.7-201ENST00000605823 252 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 RN7SKP299-201ENST00000606679 301 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AC009090.3-201ENST00000616553 565 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 MIR7153-201ENST00000637758 57 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 FARSBP1-201ENST00000435808 1778 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.34□□□□□ -1.87
CMTM3Q96MX0 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.34□□□□□ -1.87
CMTM3Q96MX0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CMTM3Q96MX0 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CMTM3Q96MX0 RNA5SP399-201ENST00000364003 117 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 RNU5E-6P-201ENST00000365574 115 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 RNU1-101P-201ENST00000391171 127 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 NDUFS5P1-201ENST00000405668 289 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 RNU2-36P-201ENST00000410361 191 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.34□□□□□ -1.87
CMTM3Q96MX0 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.34□□□□□ -1.87
CMTM3Q96MX0 RAC1P6-201ENST00000423911 575 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 DNAJC19P7-201ENST00000428811 344 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 AC007919.1-201ENST00000429380 217 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.34□□□□□ -1.87
CMTM3Q96MX0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.34□□□□□ -1.87
CMTM3Q96MX0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.34□□□□□ -1.87
CMTM3Q96MX0 Z82210.1-201ENST00000440037 231 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 BNIP3P2-201ENST00000441221 577 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.34□□□□□ -1.87
CMTM3Q96MX0 MTCO1P19-201ENST00000443487 500 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.34□□□□□ -1.87
CMTM3Q96MX0 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.34□□□□□ -1.87
CMTM3Q96MX0 AC006539.3-201ENST00000454258 129 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 AL122001.1-201ENST00000457027 370 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 RN7SL860P-201ENST00000473738 223 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 ARL2BPP4-201ENST00000506854 471 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 AC093840.1-201ENST00000511599 336 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 IGLVIV-65-201ENST00000517313 360 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 CDH12P4-201ENST00000517835 295 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 CDH12P3-201ENST00000517935 295 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 CDH12P1-201ENST00000518435 295 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.34□□□□□ -1.87
CMTM3Q96MX0 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CMTM3Q96MX0 AC053481.4-201ENST00000583164 216 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 AC040904.1-201ENST00000590850 223 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 AL133393.1-201ENST00000603277 287 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 DPPA3P3-201ENST00000603842 430 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms