Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RNU1-109P-201ENST00000383960 147 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 RN7SKP266-201ENST00000410232 287 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 RN7SKP111-201ENST00000410349 271 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 RNU2-25P-201ENST00000411041 191 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 RPL19P1-201ENST00000411635 428 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 RPS3AP25-201ENST00000411660 793 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VMP1Q96GC9 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.23□□□□□ -1.89
VMP1Q96GC9 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.23□□□□□ -1.89
VMP1Q96GC9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.23□□□□□ -1.89
VMP1Q96GC9 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.23□□□□□ -1.89
VMP1Q96GC9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.23□□□□□ -1.89
VMP1Q96GC9 AL159987.2-201ENST00000432754 307 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.23□□□□□ -1.89
VMP1Q96GC9 AC004854.1-201ENST00000440356 349 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 CYCSP32-201ENST00000440548 321 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 WASF1P1-201ENST00000447560 1131 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 PRDX3P3-201ENST00000447765 522 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 TPT1P14-201ENST00000448018 505 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 RPS15AP27-201ENST00000449183 343 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 AL009048.1-201ENST00000450437 298 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 DUXAP8-207ENST00000456786 622 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 RPL31P41-201ENST00000477967 372 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VMP1Q96GC9 AC104090.1-201ENST00000506341 1171 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 AC022447.3-201ENST00000506865 495 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.23□□□□□ -1.89
VMP1Q96GC9 MTCYBP43-201ENST00000513621 740 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.23□□□□□ -1.89
VMP1Q96GC9 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.23□□□□□ -1.89
VMP1Q96GC9 AC026333.2-201ENST00000542164 106 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.23□□□□□ -1.89
VMP1Q96GC9 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.23□□□□□ -1.89
VMP1Q96GC9 DUXAP6-201ENST00000553858 601 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.23□□□□□ -1.89
VMP1Q96GC9 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.23□□□□□ -1.89
VMP1Q96GC9 UBE2L4-201ENST00000587688 464 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.23□□□□□ -1.89
VMP1Q96GC9 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VMP1Q96GC9 AL158801.5-201ENST00000623123 465 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.23□□□□□ -1.89
VMP1Q96GC9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
VMP1Q96GC9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
VMP1Q96GC9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
VMP1Q96GC9 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
VMP1Q96GC9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
VMP1Q96GC9 FTLP6-201ENST00000355274 422 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 RNU6-1180P-201ENST00000364935 107 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 SNORD17-201ENST00000390930 237 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.22□□□□□ -1.89
VMP1Q96GC9 MTCO2P8-201ENST00000412213 658 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.22□□□□□ -1.89
VMP1Q96GC9 BX682237.1-201ENST00000415016 335 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.22□□□□□ -1.89
VMP1Q96GC9 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.22□□□□□ -1.89
VMP1Q96GC9 ELOCP9-201ENST00000418624 239 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 AL139281.1-201ENST00000422120 335 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.22□□□□□ -1.89
VMP1Q96GC9 OR6K1P-201ENST00000456766 971 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.22□□□□□ -1.89
VMP1Q96GC9 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.22□□□□□ -1.89
VMP1Q96GC9 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.22□□□□□ -1.89
VMP1Q96GC9 SEM1P1-201ENST00000506694 209 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.22□□□□□ -1.89
VMP1Q96GC9 RNU6-390P-201ENST00000516259 103 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 AC245166.1-201ENST00000521012 253 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.22□□□□□ -1.89
VMP1Q96GC9 AC007458.1-201ENST00000542812 373 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.22□□□□□ -1.89
VMP1Q96GC9 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.22□□□□□ -1.89
VMP1Q96GC9 AL391261.3-201ENST00000557194 520 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 AC010546.1-201ENST00000569391 485 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.22□□□□□ -1.89
VMP1Q96GC9 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.22□□□□□ -1.89
VMP1Q96GC9 AL391001.1-201ENST00000602747 715 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 ELOCP35-201ENST00000604289 336 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 AL137843.1-201ENST00000605078 385 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 AL627309.6-201ENST00000606857 840 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 AC069200.1-201ENST00000609511 323 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.22□□□□□ -1.89
VMP1Q96GC9 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.22□□□□□ -1.89
VMP1Q96GC9 AP000484.1-201ENST00000620067 1252 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 AP000676.3-201ENST00000623299 569 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 AC103798.2-201ENST00000624292 632 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 AC004777.1-201ENST00000624317 287 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 AC073476.4-201ENST00000628409 72 ntBASIC3.22□□□□□ -1.89
VMP1Q96GC9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.21□□□□□ -1.9
VMP1Q96GC9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.21□□□□□ -1.9
VMP1Q96GC9 AC106754.1-201ENST00000562632 1513 ntBASIC3.21□□□□□ -1.9
VMP1Q96GC9 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
VMP1Q96GC9 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VMP1Q96GC9 AL358075.3-201ENST00000426289 226 ntBASIC3.21□□□□□ -1.9
VMP1Q96GC9 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.21□□□□□ -1.9
VMP1Q96GC9 AC005019.1-201ENST00000436455 431 ntBASIC3.21□□□□□ -1.9
VMP1Q96GC9 HMGB3P11-201ENST00000440127 604 ntBASIC3.21□□□□□ -1.9
VMP1Q96GC9 MTCO3P45-201ENST00000443036 613 ntBASIC3.21□□□□□ -1.9
VMP1Q96GC9 AC009296.1-201ENST00000443146 155 ntBASIC3.21□□□□□ -1.9
VMP1Q96GC9 COX6CP2-201ENST00000444980 225 ntBASIC3.21□□□□□ -1.9
VMP1Q96GC9 AL357552.1-201ENST00000445254 415 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms