Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SNORA73.1-201ENST00000363107 205 ntBASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 RNU6-806P-201ENST00000365147 105 ntBASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 SNORD113-1-201ENST00000365321 69 ntBASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 RNU5E-6P-201ENST00000365574 115 ntBASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 RNU6-306P-201ENST00000384617 107 ntBASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 RPL30P2-201ENST00000414021 291 ntBASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 NOTCH2P1-201ENST00000443481 624 ntBASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 CHEK2P4-201ENST00000450340 246 ntBASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 MTCO3P44-201ENST00000510977 541 ntBASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 SNORA14.1-201ENST00000516113 141 ntBASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 RNA5SP464-201ENST00000516251 108 ntBASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 RNU6-1332P-201ENST00000516666 104 ntBASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 FAM60DP-201ENST00000524174 632 ntBASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 AC040926.1-201ENST00000530195 238 ntBASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 AL049839.1-201ENST00000556151 657 ntBASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 MIR5188-201ENST00000583467 113 ntBASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 AC008758.3-201ENST00000507003 1829 ntBASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 AC126323.6-202ENST00000568092 3511 ntBASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 AC103710.2-202ENST00000641454 2853 ntBASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 Y_RNA.29-201ENST00000362570 113 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 RNU6-1059P-201ENST00000363752 98 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 Y_RNA.270-201ENST00000364693 104 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 SNORA62-201ENST00000365493 153 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 SNORA70F-201ENST00000384142 135 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 RNU6-886P-201ENST00000384319 105 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 AC096664.2-201ENST00000411843 406 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 AP000275.1-201ENST00000411943 390 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 HMGN1P24-201ENST00000412282 298 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 RPLP0P7-201ENST00000416050 667 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 RPL18P10-201ENST00000425606 538 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 MRPS18BP2-201ENST00000434310 759 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 AC016831.4-201ENST00000438302 307 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 AC108860.1-201ENST00000484521 383 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 AC026979.1-201ENST00000492525 396 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 SNORA25.11-201ENST00000515935 105 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 SNORA40.14-201ENST00000516543 86 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 AC133555.2-201ENST00000550213 292 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 MIR3133-201ENST00000583157 78 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 AC012433.1-201ENST00000588916 398 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 HMGB2P1-201ENST00000591146 634 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 AC004792.1-201ENST00000614523 137 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 AC083809.1-201ENST00000615051 472 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 AL136313.1-201ENST00000624804 202 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 AC091925.2-201ENST00000625059 256 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 AC132825.6-201ENST00000638861 357 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 AC104623.2-202ENST00000623477 4002 ntBASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SHKBP1Q8TBC3 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHKBP1Q8TBC3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHKBP1Q8TBC3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHKBP1Q8TBC3 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHKBP1Q8TBC3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
SHKBP1Q8TBC3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHKBP1Q8TBC3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHKBP1Q8TBC3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHKBP1Q8TBC3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms