Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 ARL2BPP2-201ENST00000550907 489 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.59□□□□□ -2.31
SYNE1Q8NF91 AC055764.2-201ENST00000610089 670 ntBASIC0.59□□□□□ -2.31
SYNE1Q8NF91 RBBP8P1-201ENST00000449447 1844 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AC135776.4-201ENST00000624300 1904 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC0.59□□□□□ -2.32
SYNE1Q8NF91 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC0.59□□□□□ -2.32
SYNE1Q8NF91 U8.10-201ENST00000384260 133 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 RNU4-74P-201ENST00000411280 161 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC0.59□□□□□ -2.32
SYNE1Q8NF91 HMGN2P30-201ENST00000423237 256 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 HMGB1P38-201ENST00000490557 577 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AC025459.1-201ENST00000504072 156 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AC098799.2-201ENST00000509466 868 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC0.59□□□□□ -2.32
SYNE1Q8NF91 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC0.59□□□□□ -2.32
SYNE1Q8NF91 MIR8081-201ENST00000611533 95 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AC009831.4-201ENST00000620744 325 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AC006249.1-201ENST00000621223 471 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
SYNE1Q8NF91 MTND4P31-201ENST00000425607 1343 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
SYNE1Q8NF91 HMGB3P2-201ENST00000411913 584 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AC099677.1-201ENST00000420575 175 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 OFD1P12Y-201ENST00000427963 1207 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
SYNE1Q8NF91 DYNLL1P5-201ENST00000467158 270 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AC017007.3-201ENST00000479865 435 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 RPL30P14-201ENST00000482744 348 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AC004923.2-201ENST00000529649 369 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AC113194.1-201ENST00000606037 500 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AC008669.1-201ENST00000565823 2178 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC0.59□□□□□ -2.32
SYNE1Q8NF91 ANKRD18EP-201ENST00000405487 2632 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AC002543.1-201ENST00000299783 1954 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 PABPC1P9-201ENST00000426076 1612 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC0.59□□□□□ -2.32
SYNE1Q8NF91 POLHP1-201ENST00000411806 470 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AC092638.1-201ENST00000411966 1275 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.59□□□□□ -2.32
SYNE1Q8NF91 MORF4L1P7-201ENST00000426038 703 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 UBE2FP3-201ENST00000436366 524 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AC108078.1-201ENST00000508073 725 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AC008526.1-201ENST00000509149 338 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC0.59□□□□□ -2.32
SYNE1Q8NF91 AC084373.1-201ENST00000603311 235 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 BX248123.2-201ENST00000606318 124 ntBASIC0.59□□□□□ -2.32
SYNE1Q8NF91 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC0.59□□□□□ -2.32
SYNE1Q8NF91 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC0.59□□□□□ -2.32
SYNE1Q8NF91 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AC087359.1-201ENST00000508335 1740 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 SFR1P1-201ENST00000403720 688 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 RPL23AP58-201ENST00000440453 469 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AC011352.3-201ENST00000505162 593 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AC087808.1-201ENST00000520501 361 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AL109653.1-201ENST00000603091 248 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AL391987.6-201ENST00000305671 199 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 Y_RNA.30-201ENST00000362572 97 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 RNU1-51P-201ENST00000365345 176 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 RNU6-1105P-201ENST00000384774 107 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 CBX3P4-201ENST00000538909 354 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AC018926.3-201ENST00000618841 406 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 RNU6-31P-201ENST00000384388 108 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 RAD23BP2-201ENST00000416003 1207 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 RN7SKP49-201ENST00000516675 260 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 LRRC37A5P-203ENST00000580181 585 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 HMGN2P28-201ENST00000606102 262 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 SDAD1P2-201ENST00000441308 2028 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 SNORA40.18-201ENST00000391200 128 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 CBWD4P-201ENST00000445695 655 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 HMGN2P16-201ENST00000456802 261 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms