Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.32□□□□□ -1.56
USP48Q86UV5 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.32□□□□□ -1.56
USP48Q86UV5 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.32□□□□□ -1.56
USP48Q86UV5 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
USP48Q86UV5 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
USP48Q86UV5 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
USP48Q86UV5 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP48Q86UV5 GABPAP-201ENST00000419271 1356 ntBASIC5.31□□□□□ -1.56
USP48Q86UV5 EXOC5P1-201ENST00000510543 1969 ntBASIC5.31□□□□□ -1.56
USP48Q86UV5 BDP1P-201ENST00000582658 1990 ntBASIC5.31□□□□□ -1.56
USP48Q86UV5 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP48Q86UV5 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP48Q86UV5 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
USP48Q86UV5 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
USP48Q86UV5 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP48Q86UV5 AL162578.1-201ENST00000406202 378 ntBASIC5.31□□□□□ -1.56
USP48Q86UV5 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP48Q86UV5 PDCL2P1-201ENST00000419302 352 ntBASIC5.31□□□□□ -1.56
USP48Q86UV5 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.31□□□□□ -1.56
USP48Q86UV5 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.31□□□□□ -1.56
USP48Q86UV5 RPL23AP52-201ENST00000439311 478 ntBASIC5.31□□□□□ -1.56
USP48Q86UV5 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.31□□□□□ -1.56
USP48Q86UV5 AC012158.1-204ENST00000483430 465 ntBASIC5.31□□□□□ -1.56
USP48Q86UV5 AC146944.2-203ENST00000502493 354 ntBASIC5.31□□□□□ -1.56
USP48Q86UV5 AC108145.1-201ENST00000503770 153 ntBASIC5.31□□□□□ -1.56
USP48Q86UV5 AC008958.1-201ENST00000511047 682 ntBASIC5.31□□□□□ -1.56
USP48Q86UV5 AC139495.1-202ENST00000513164 354 ntBASIC5.31□□□□□ -1.56
USP48Q86UV5 RNU6-1092P-201ENST00000516955 87 ntBASIC5.31□□□□□ -1.56
USP48Q86UV5 IGKV2-23-201ENST00000518729 323 ntBASIC5.31□□□□□ -1.56
USP48Q86UV5 AC243972.3-201ENST00000539655 198 ntBASIC5.31□□□□□ -1.56
USP48Q86UV5 AC126177.3-201ENST00000551839 688 ntBASIC5.31□□□□□ -1.56
USP48Q86UV5 AC125611.2-201ENST00000551907 647 ntBASIC5.31□□□□□ -1.56
USP48Q86UV5 HMGB3P26-201ENST00000560051 582 ntBASIC5.31□□□□□ -1.56
USP48Q86UV5 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.31□□□□□ -1.56
USP48Q86UV5 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP48Q86UV5 AC243312.2-201ENST00000623340 601 ntBASIC5.31□□□□□ -1.56
USP48Q86UV5 AC006065.5-201ENST00000623427 349 ntBASIC5.31□□□□□ -1.56
USP48Q86UV5 U6.114-201ENST00000636407 96 ntBASIC5.31□□□□□ -1.56
USP48Q86UV5 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.31□□□□□ -1.56
USP48Q86UV5 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP48Q86UV5 SCN1A-220ENST00000641603 12506 ntBASIC5.31□□□□□ -1.56
USP48Q86UV5 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.31□□□□□ -1.56
USP48Q86UV5 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP48Q86UV5 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP48Q86UV5 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
USP48Q86UV5 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP48Q86UV5 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP48Q86UV5 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP48Q86UV5 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
USP48Q86UV5 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USP48Q86UV5 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP48Q86UV5 Y_RNA.166-201ENST00000363730 102 ntBASIC5.3□□□□□ -1.56
USP48Q86UV5 RNU6-960P-201ENST00000364056 120 ntBASIC5.3□□□□□ -1.56
USP48Q86UV5 SNORD46.1-201ENST00000364139 104 ntBASIC5.3□□□□□ -1.56
USP48Q86UV5 FAT1P1-201ENST00000406588 507 ntBASIC5.3□□□□□ -1.56
USP48Q86UV5 RNU2-29P-201ENST00000410423 189 ntBASIC5.3□□□□□ -1.56
USP48Q86UV5 GOT2P5-201ENST00000433995 546 ntBASIC5.3□□□□□ -1.56
USP48Q86UV5 RPS29P7-201ENST00000439662 171 ntBASIC5.3□□□□□ -1.56
USP48Q86UV5 MTCO3P45-201ENST00000443036 613 ntBASIC5.3□□□□□ -1.56
USP48Q86UV5 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.3□□□□□ -1.56
USP48Q86UV5 RPL7P12-201ENST00000446719 750 ntBASIC5.3□□□□□ -1.56
USP48Q86UV5 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.3□□□□□ -1.56
USP48Q86UV5 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.3□□□□□ -1.56
USP48Q86UV5 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.3□□□□□ -1.56
USP48Q86UV5 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.3□□□□□ -1.56
USP48Q86UV5 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.3□□□□□ -1.56
USP48Q86UV5 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.3□□□□□ -1.56
USP48Q86UV5 BNIP3P6-201ENST00000549284 499 ntBASIC5.3□□□□□ -1.56
USP48Q86UV5 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.3□□□□□ -1.56
USP48Q86UV5 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC5.3□□□□□ -1.56
USP48Q86UV5 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.3□□□□□ -1.56
USP48Q86UV5 MTCO3P13-201ENST00000577757 781 ntBASIC5.3□□□□□ -1.56
USP48Q86UV5 RNA5SP108-201ENST00000605921 117 ntBASIC5.3□□□□□ -1.56
USP48Q86UV5 AL050343.2-201ENST00000607338 280 ntBASIC5.3□□□□□ -1.56
USP48Q86UV5 uc_338.11-201ENST00000619132 160 ntBASIC5.3□□□□□ -1.56
USP48Q86UV5 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP48Q86UV5 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP48Q86UV5 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.3□□□□□ -1.56
USP48Q86UV5 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USP48Q86UV5 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
USP48Q86UV5 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP48Q86UV5 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
USP48Q86UV5 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
USP48Q86UV5 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USP48Q86UV5 AC067945.1-201ENST00000342609 618 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 RNU4-79P-201ENST00000362764 141 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 RNU6-552P-201ENST00000362869 119 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USP48Q86UV5 Y_RNA.394-201ENST00000383942 103 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 RNU6-1029P-201ENST00000384109 107 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 AL161631.1-201ENST00000417933 486 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.29□□□□□ -1.56
USP48Q86UV5 AC099677.1-201ENST00000420575 175 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 AC007389.2-201ENST00000434630 306 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.29□□□□□ -1.56
USP48Q86UV5 RN7SL432P-201ENST00000484057 298 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC5.29□□□□□ -1.56
USP48Q86UV5 Y_RNA.675-201ENST00000516389 149 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 SUMO2P20-201ENST00000520803 283 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 AC022690.1-201ENST00000526681 550 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms