Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 Z82243.1-201ENST00000609432 473 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 AL161616.1-201ENST00000611867 286 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 AC012409.4-201ENST00000612923 249 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 AC100827.5-201ENST00000615883 426 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 LINC00901.1-201ENST00000617252 152 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CLRN1P58418 AC007998.5-201ENST00000622938 237 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLRN1P58418 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.01□□□□□ -1.77
CLRN1P58418 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLRN1P58418 AL137003.2-201ENST00000606924 2538 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 AC103710.2-202ENST00000641454 2853 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLRN1P58418 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLRN1P58418 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLRN1P58418 AC121333.1-201ENST00000567488 2709 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLRN1P58418 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CLRN1P58418 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4□□□□□ -1.77
CLRN1P58418 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4□□□□□ -1.77
CLRN1P58418 MTND5P3-201ENST00000438536 1800 ntBASIC4□□□□□ -1.77
CLRN1P58418 CPHL1P-201ENST00000461341 3407 ntBASIC4□□□□□ -1.77
CLRN1P58418 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4□□□□□ -1.77
CLRN1P58418 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4□□□□□ -1.77
CLRN1P58418 RNU6-1252P-201ENST00000363054 104 ntBASIC4□□□□□ -1.77
CLRN1P58418 RNU6-82P-201ENST00000363970 107 ntBASIC4□□□□□ -1.77
CLRN1P58418 SNORA58B-201ENST00000364259 136 ntBASIC4□□□□□ -1.77
CLRN1P58418 RNU1-44P-201ENST00000384453 163 ntBASIC4□□□□□ -1.77
CLRN1P58418 SNORD3H-201ENST00000384486 214 ntBASIC4□□□□□ -1.77
CLRN1P58418 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4□□□□□ -1.77
CLRN1P58418 RNU6-882P-201ENST00000391025 103 ntBASIC4□□□□□ -1.77
CLRN1P58418 RPL7AP73-201ENST00000413490 353 ntBASIC4□□□□□ -1.77
CLRN1P58418 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4□□□□□ -1.77
CLRN1P58418 AL049745.1-201ENST00000433953 286 ntBASIC4□□□□□ -1.77
CLRN1P58418 RPL21P112-201ENST00000434403 463 ntBASIC4□□□□□ -1.77
CLRN1P58418 AL121871.1-201ENST00000443413 436 ntBASIC4□□□□□ -1.77
CLRN1P58418 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4□□□□□ -1.77
CLRN1P58418 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4□□□□□ -1.77
CLRN1P58418 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4□□□□□ -1.77
CLRN1P58418 RN7SL354P-201ENST00000469282 294 ntBASIC4□□□□□ -1.77
CLRN1P58418 RPL21P93-201ENST00000480465 489 ntBASIC4□□□□□ -1.77
CLRN1P58418 RPS23P1-201ENST00000491662 432 ntBASIC4□□□□□ -1.77
CLRN1P58418 RNA5SP360-201ENST00000516555 118 ntBASIC4□□□□□ -1.77
CLRN1P58418 RNU6-273P-201ENST00000516937 96 ntBASIC4□□□□□ -1.77
CLRN1P58418 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4□□□□□ -1.77
CLRN1P58418 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4□□□□□ -1.77
CLRN1P58418 AP005597.4-201ENST00000526762 229 ntBASIC4□□□□□ -1.77
CLRN1P58418 AP001781.1-201ENST00000530977 207 ntBASIC4□□□□□ -1.77
CLRN1P58418 AP000763.2-201ENST00000540641 163 ntBASIC4□□□□□ -1.77
CLRN1P58418 AC018630.1-201ENST00000541376 925 ntBASIC4□□□□□ -1.77
CLRN1P58418 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4□□□□□ -1.77
CLRN1P58418 OR4H12P-201ENST00000556269 907 ntBASIC4□□□□□ -1.77
CLRN1P58418 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4□□□□□ -1.77
CLRN1P58418 AC069061.3-201ENST00000582254 823 ntBASIC4□□□□□ -1.77
CLRN1P58418 POLR3GP2-201ENST00000588366 668 ntBASIC4□□□□□ -1.77
CLRN1P58418 AC092747.3-201ENST00000603769 301 ntBASIC4□□□□□ -1.77
CLRN1P58418 AL158032.1-201ENST00000605401 106 ntBASIC4□□□□□ -1.77
CLRN1P58418 Mico1.1-201ENST00000611698 204 ntBASIC4□□□□□ -1.77
CLRN1P58418 DUSP12P1-201ENST00000612874 516 ntBASIC4□□□□□ -1.77
CLRN1P58418 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4□□□□□ -1.77
CLRN1P58418 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLRN1P58418 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4□□□□□ -1.77
CLRN1P58418 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.99□□□□□ -1.77
CLRN1P58418 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
CLRN1P58418 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.99□□□□□ -1.77
CLRN1P58418 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLRN1P58418 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLRN1P58418 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.99□□□□□ -1.77
CLRN1P58418 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.99□□□□□ -1.77
CLRN1P58418 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLRN1P58418 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.99□□□□□ -1.77
CLRN1P58418 Y_RNA.138-201ENST00000363462 102 ntBASIC3.99□□□□□ -1.77
CLRN1P58418 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CLRN1P58418 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CLRN1P58418 POLHP1-201ENST00000411806 470 ntBASIC3.99□□□□□ -1.77
CLRN1P58418 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.99□□□□□ -1.77
CLRN1P58418 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.99□□□□□ -1.77
CLRN1P58418 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.99□□□□□ -1.77
CLRN1P58418 ARL2BPP10-201ENST00000446487 531 ntBASIC3.99□□□□□ -1.77
CLRN1P58418 RPS15AP27-201ENST00000449183 343 ntBASIC3.99□□□□□ -1.77
CLRN1P58418 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLRN1P58418 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLRN1P58418 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.99□□□□□ -1.77
CLRN1P58418 SNORD19B-201ENST00000459623 84 ntBASIC3.99□□□□□ -1.77
CLRN1P58418 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLRN1P58418 MTCO1P29-201ENST00000496868 288 ntBASIC3.99□□□□□ -1.77
CLRN1P58418 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.99□□□□□ -1.77
CLRN1P58418 RN7SKP13-201ENST00000515933 244 ntBASIC3.99□□□□□ -1.77
CLRN1P58418 Y_RNA.682-201ENST00000516457 100 ntBASIC3.99□□□□□ -1.77
CLRN1P58418 RNU6-1088P-201ENST00000516850 104 ntBASIC3.99□□□□□ -1.77
CLRN1P58418 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.99□□□□□ -1.77
CLRN1P58418 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.99□□□□□ -1.77
CLRN1P58418 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.99□□□□□ -1.77
CLRN1P58418 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.99□□□□□ -1.77
CLRN1P58418 OR11H5P-201ENST00000554039 926 ntBASIC3.99□□□□□ -1.77
CLRN1P58418 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.99□□□□□ -1.77
CLRN1P58418 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.99□□□□□ -1.77
CLRN1P58418 AC022432.1-201ENST00000595739 310 ntBASIC3.99□□□□□ -1.77
CLRN1P58418 AC024940.4-201ENST00000605507 246 ntBASIC3.99□□□□□ -1.77
CLRN1P58418 AC007619.2-201ENST00000605743 379 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms