Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RNA5SP282-201ENST00000516355 108 ntBASIC2.68□□□□□ -1.98
CDH6P55285 RPPH1-2P-201ENST00000516688 293 ntBASIC2.68□□□□□ -1.98
CDH6P55285 AC087808.1-201ENST00000520501 361 ntBASIC2.68□□□□□ -1.98
CDH6P55285 CKS1BP7-201ENST00000522230 235 ntBASIC2.68□□□□□ -1.98
CDH6P55285 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.68□□□□□ -1.98
CDH6P55285 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CDH6P55285 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.68□□□□□ -1.98
CDH6P55285 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH6P55285 HMGB1P6-201ENST00000569046 646 ntBASIC2.68□□□□□ -1.98
CDH6P55285 AC008507.2-201ENST00000588402 1176 ntBASIC2.68□□□□□ -1.98
CDH6P55285 AC008739.2-201ENST00000597006 317 ntBASIC2.68□□□□□ -1.98
CDH6P55285 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH6P55285 SNHG22-203ENST00000617833 660 ntBASIC2.68□□□□□ -1.98
CDH6P55285 AC008669.1-201ENST00000565823 2178 ntBASIC2.68□□□□□ -1.98
CDH6P55285 MAPK10-266ENST00000641066 6555 ntBASIC2.68□□□□□ -1.98
CDH6P55285 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.67□□□□□ -1.98
CDH6P55285 AC005539.1-201ENST00000443768 1479 ntBASIC2.67□□□□□ -1.98
CDH6P55285 CDR1-202ENST00000625883 1485 ntBASIC2.67□□□□□ -1.98
CDH6P55285 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CDH6P55285 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CDH6P55285 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.67□□□□□ -1.98
CDH6P55285 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CDH6P55285 U3.26-201ENST00000391236 204 ntBASIC2.67□□□□□ -1.98
CDH6P55285 MTCO1P56-201ENST00000401674 224 ntBASIC2.67□□□□□ -1.98
CDH6P55285 RNU2-52P-201ENST00000410680 190 ntBASIC2.67□□□□□ -1.98
CDH6P55285 RNU2-25P-201ENST00000411041 191 ntBASIC2.67□□□□□ -1.98
CDH6P55285 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH6P55285 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.67□□□□□ -1.98
CDH6P55285 C1DP1-201ENST00000426049 402 ntBASIC2.67□□□□□ -1.98
CDH6P55285 TAAR7P-201ENST00000436141 242 ntBASIC2.67□□□□□ -1.98
CDH6P55285 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.67□□□□□ -1.98
CDH6P55285 AC009237.8-201ENST00000445492 379 ntBASIC2.67□□□□□ -1.98
CDH6P55285 AP000936.2-201ENST00000447151 681 ntBASIC2.67□□□□□ -1.98
CDH6P55285 HMGN1P5-201ENST00000448591 263 ntBASIC2.67□□□□□ -1.98
CDH6P55285 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CDH6P55285 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH6P55285 AC126182.1-201ENST00000478134 357 ntBASIC2.67□□□□□ -1.98
CDH6P55285 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH6P55285 AC114981.1-201ENST00000503897 678 ntBASIC2.67□□□□□ -1.98
CDH6P55285 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.67□□□□□ -1.98
CDH6P55285 AC147055.4-201ENST00000504399 745 ntBASIC2.67□□□□□ -1.98
CDH6P55285 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.67□□□□□ -1.98
CDH6P55285 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.67□□□□□ -1.98
CDH6P55285 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CDH6P55285 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CDH6P55285 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CDH6P55285 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH6P55285 AMZ2P1-203ENST00000565833 850 ntBASIC2.67□□□□□ -1.98
CDH6P55285 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.67□□□□□ -1.98
CDH6P55285 AC010620.2-201ENST00000600135 313 ntBASIC2.67□□□□□ -1.98
CDH6P55285 AL022067.1-201ENST00000602426 454 ntBASIC2.67□□□□□ -1.98
CDH6P55285 AC069545.1-201ENST00000605671 358 ntBASIC2.67□□□□□ -1.98
CDH6P55285 AL161734.1-201ENST00000609720 557 ntBASIC2.67□□□□□ -1.98
CDH6P55285 AC006213.4-201ENST00000616184 634 ntBASIC2.67□□□□□ -1.98
CDH6P55285 MIR6130-201ENST00000619419 109 ntBASIC2.67□□□□□ -1.98
CDH6P55285 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.67□□□□□ -1.98
CDH6P55285 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.67□□□□□ -1.98
CDH6P55285 ZNF519P1-201ENST00000449011 1626 ntBASIC2.67□□□□□ -1.98
CDH6P55285 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.67□□□□□ -1.98
CDH6P55285 AL356473.1-201ENST00000406203 1408 ntBASIC2.67□□□□□ -1.98
CDH6P55285 AC005832.2-201ENST00000538921 1430 ntBASIC2.67□□□□□ -1.98
CDH6P55285 AP005901.5-201ENST00000545779 1796 ntBASIC2.66□□□□□ -1.98
CDH6P55285 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDH6P55285 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.66□□□□□ -1.98
CDH6P55285 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.66□□□□□ -1.98
CDH6P55285 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDH6P55285 RNU6-525P-201ENST00000363685 104 ntBASIC2.66□□□□□ -1.98
CDH6P55285 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CDH6P55285 RNU6-76P-201ENST00000384060 104 ntBASIC2.66□□□□□ -1.98
CDH6P55285 RNU2-42P-201ENST00000410697 113 ntBASIC2.66□□□□□ -1.98
CDH6P55285 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH6P55285 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.66□□□□□ -1.98
CDH6P55285 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH6P55285 NDUFB4P7-201ENST00000423198 363 ntBASIC2.66□□□□□ -1.98
CDH6P55285 AC091390.3-201ENST00000426478 338 ntBASIC2.66□□□□□ -1.98
CDH6P55285 RPL7L1P10-201ENST00000427790 463 ntBASIC2.66□□□□□ -1.98
CDH6P55285 AC129850.1-201ENST00000436203 508 ntBASIC2.66□□□□□ -1.98
CDH6P55285 SDCBPP1-201ENST00000440192 890 ntBASIC2.66□□□□□ -1.98
CDH6P55285 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CDH6P55285 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH6P55285 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH6P55285 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH6P55285 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH6P55285 snoU13.28-201ENST00000459235 104 ntBASIC2.66□□□□□ -1.98
CDH6P55285 HSPE1P6-201ENST00000479457 291 ntBASIC2.66□□□□□ -1.98
CDH6P55285 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CDH6P55285 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH6P55285 AC114322.1-201ENST00000506771 926 ntBASIC2.66□□□□□ -1.98
CDH6P55285 MTCYBP16-201ENST00000509187 1129 ntBASIC2.66□□□□□ -1.98
CDH6P55285 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.66□□□□□ -1.98
CDH6P55285 AC017037.2-201ENST00000513850 890 ntBASIC2.66□□□□□ -1.98
CDH6P55285 RNA5SP356-201ENST00000515972 94 ntBASIC2.66□□□□□ -1.98
CDH6P55285 RNU6-826P-201ENST00000516827 104 ntBASIC2.66□□□□□ -1.98
CDH6P55285 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.66□□□□□ -1.98
CDH6P55285 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.66□□□□□ -1.98
CDH6P55285 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH6P55285 AC243972.3-201ENST00000539655 198 ntBASIC2.66□□□□□ -1.98
CDH6P55285 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH6P55285 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH6P55285 AC090615.1-201ENST00000577519 154 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms