Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AP003122.6-201ENST00000623831 495 ntBASIC3.19□□□□□ -1.9
VCPP55072 MTND5P7-201ENST00000413558 1798 ntBASIC3.19□□□□□ -1.9
VCPP55072 MTND5P19-201ENST00000424872 1794 ntBASIC3.19□□□□□ -1.9
VCPP55072 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.19□□□□□ -1.9
VCPP55072 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.19□□□□□ -1.9
VCPP55072 AC011460.1-201ENST00000636268 1834 ntBASIC3.19□□□□□ -1.9
VCPP55072 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
VCPP55072 AL672167.1-206ENST00000356293 943 ntBASIC3.18□□□□□ -1.9
VCPP55072 RNU6-878P-201ENST00000384578 110 ntBASIC3.18□□□□□ -1.9
VCPP55072 SNORD15B-201ENST00000384714 146 ntBASIC3.18□□□□□ -1.9
VCPP55072 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.18□□□□□ -1.9
VCPP55072 ELOCP9-201ENST00000418624 239 ntBASIC3.18□□□□□ -1.9
VCPP55072 TIMM9P2-201ENST00000419324 266 ntBASIC3.18□□□□□ -1.9
VCPP55072 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.18□□□□□ -1.9
VCPP55072 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.18□□□□□ -1.9
VCPP55072 AC104332.2-201ENST00000429959 156 ntBASIC3.18□□□□□ -1.9
VCPP55072 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.18□□□□□ -1.9
VCPP55072 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.18□□□□□ -1.9
VCPP55072 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
VCPP55072 COX7BP2-201ENST00000437976 242 ntBASIC3.18□□□□□ -1.9
VCPP55072 RPS24P13-201ENST00000442520 397 ntBASIC3.18□□□□□ -1.9
VCPP55072 OFD1P3Y-201ENST00000453312 783 ntBASIC3.18□□□□□ -1.9
VCPP55072 AC026410.2-201ENST00000460281 156 ntBASIC3.18□□□□□ -1.9
VCPP55072 MTND1P16-201ENST00000465177 898 ntBASIC3.18□□□□□ -1.9
VCPP55072 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.18□□□□□ -1.9
VCPP55072 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.18□□□□□ -1.9
VCPP55072 MTCYBP17-201ENST00000503579 789 ntBASIC3.18□□□□□ -1.9
VCPP55072 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
VCPP55072 Y_RNA.673-201ENST00000516306 88 ntBASIC3.18□□□□□ -1.9
VCPP55072 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.18□□□□□ -1.9
VCPP55072 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.18□□□□□ -1.9
VCPP55072 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VCPP55072 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VCPP55072 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.18□□□□□ -1.9
VCPP55072 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.18□□□□□ -1.9
VCPP55072 NBEAP1-201ENST00000554452 979 ntBASIC3.18□□□□□ -1.9
VCPP55072 MTND4P33-201ENST00000556706 766 ntBASIC3.18□□□□□ -1.9
VCPP55072 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.18□□□□□ -1.9
VCPP55072 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.18□□□□□ -1.9
VCPP55072 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VCPP55072 MAGOH2P-202ENST00000584384 429 ntBASIC3.18□□□□□ -1.9
VCPP55072 AC091057.2-201ENST00000602594 792 ntBASIC3.18□□□□□ -1.9
VCPP55072 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.18□□□□□ -1.9
VCPP55072 AC091925.2-201ENST00000625059 256 ntBASIC3.18□□□□□ -1.9
VCPP55072 AC116618.1-201ENST00000634617 774 ntBASIC3.18□□□□□ -1.9
VCPP55072 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.18□□□□□ -1.9
VCPP55072 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.18□□□□□ -1.9
VCPP55072 AC090740.1-201ENST00000623193 2262 ntBASIC3.18□□□□□ -1.9
VCPP55072 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
VCPP55072 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VCPP55072 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.17□□□□□ -1.9
VCPP55072 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VCPP55072 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VCPP55072 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
VCPP55072 RNU6-621P-201ENST00000364752 109 ntBASIC3.17□□□□□ -1.9
VCPP55072 SNORA51.4-201ENST00000364993 124 ntBASIC3.17□□□□□ -1.9
VCPP55072 Y_RNA.311-201ENST00000365068 96 ntBASIC3.17□□□□□ -1.9
VCPP55072 MIR513B-201ENST00000385136 84 ntBASIC3.17□□□□□ -1.9
VCPP55072 RPS4XP3-201ENST00000398541 413 ntBASIC3.17□□□□□ -1.9
VCPP55072 RNA5SP274-201ENST00000410484 108 ntBASIC3.17□□□□□ -1.9
VCPP55072 RPS15AP38-201ENST00000413110 372 ntBASIC3.17□□□□□ -1.9
VCPP55072 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.17□□□□□ -1.9
VCPP55072 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.17□□□□□ -1.9
VCPP55072 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.17□□□□□ -1.9
VCPP55072 MTCO1P39-201ENST00000426148 480 ntBASIC3.17□□□□□ -1.9
VCPP55072 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.17□□□□□ -1.9
VCPP55072 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.17□□□□□ -1.9
VCPP55072 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.17□□□□□ -1.9
VCPP55072 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.17□□□□□ -1.9
VCPP55072 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.17□□□□□ -1.9
VCPP55072 snoU13.26-201ENST00000459452 105 ntBASIC3.17□□□□□ -1.9
VCPP55072 SNORD11.1-201ENST00000459482 85 ntBASIC3.17□□□□□ -1.9
VCPP55072 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.17□□□□□ -1.9
VCPP55072 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.17□□□□□ -1.9
VCPP55072 RNY4P37-201ENST00000516225 96 ntBASIC3.17□□□□□ -1.9
VCPP55072 RNU6-56P-201ENST00000516986 93 ntBASIC3.17□□□□□ -1.9
VCPP55072 RN7SKP272-201ENST00000516988 232 ntBASIC3.17□□□□□ -1.9
VCPP55072 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
VCPP55072 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VCPP55072 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.17□□□□□ -1.9
VCPP55072 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VCPP55072 MED28P6-201ENST00000558776 231 ntBASIC3.17□□□□□ -1.9
VCPP55072 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.17□□□□□ -1.9
VCPP55072 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.17□□□□□ -1.9
VCPP55072 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.17□□□□□ -1.9
VCPP55072 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
VCPP55072 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.17□□□□□ -1.9
VCPP55072 AP000676.4-201ENST00000624659 623 ntBASIC3.17□□□□□ -1.9
VCPP55072 MIR622-201ENST00000638396 96 ntBASIC3.17□□□□□ -1.9
VCPP55072 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VCPP55072 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VCPP55072 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
VCPP55072 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
VCPP55072 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.16□□□□□ -1.9
VCPP55072 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.16□□□□□ -1.9
VCPP55072 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VCPP55072 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
VCPP55072 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
VCPP55072 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.16□□□□□ -1.9
VCPP55072 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms