Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC022690.1-201ENST00000526681 550 ntBASIC4.08□□□□□ -1.76
NEK3P51956 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.08□□□□□ -1.76
NEK3P51956 AC087883.1-201ENST00000551882 391 ntBASIC4.08□□□□□ -1.76
NEK3P51956 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.08□□□□□ -1.76
NEK3P51956 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.08□□□□□ -1.76
NEK3P51956 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.08□□□□□ -1.76
NEK3P51956 AC087683.1-201ENST00000591187 441 ntBASIC4.08□□□□□ -1.76
NEK3P51956 AL606490.9-201ENST00000603331 271 ntBASIC4.08□□□□□ -1.76
NEK3P51956 AC104073.3-201ENST00000610942 955 ntBASIC4.08□□□□□ -1.76
NEK3P51956 AL589743.7-201ENST00000612637 233 ntBASIC4.08□□□□□ -1.76
NEK3P51956 HULC.1-201ENST00000612720 240 ntBASIC4.08□□□□□ -1.76
NEK3P51956 AC005332.10-201ENST00000612725 619 ntBASIC4.08□□□□□ -1.76
NEK3P51956 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NEK3P51956 MIR6500-201ENST00000622700 86 ntBASIC4.08□□□□□ -1.76
NEK3P51956 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.08□□□□□ -1.76
NEK3P51956 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.08□□□□□ -1.76
NEK3P51956 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NEK3P51956 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NEK3P51956 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
NEK3P51956 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NEK3P51956 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
NEK3P51956 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NEK3P51956 RPL7P26-201ENST00000333817 754 ntBASIC4.07□□□□□ -1.76
NEK3P51956 RNU6-960P-201ENST00000364056 120 ntBASIC4.07□□□□□ -1.76
NEK3P51956 RNU5E-6P-201ENST00000365574 115 ntBASIC4.07□□□□□ -1.76
NEK3P51956 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NEK3P51956 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
NEK3P51956 SNORA20.2-201ENST00000383922 131 ntBASIC4.07□□□□□ -1.76
NEK3P51956 Z98941.1-201ENST00000407764 100 ntBASIC4.07□□□□□ -1.76
NEK3P51956 RNU2-16P-201ENST00000410712 136 ntBASIC4.07□□□□□ -1.76
NEK3P51956 AMD1P2-201ENST00000412936 992 ntBASIC4.07□□□□□ -1.76
NEK3P51956 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.07□□□□□ -1.76
NEK3P51956 AL358472.1-201ENST00000431295 329 ntBASIC4.07□□□□□ -1.76
NEK3P51956 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.07□□□□□ -1.76
NEK3P51956 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.07□□□□□ -1.76
NEK3P51956 SSXP4-201ENST00000451349 245 ntBASIC4.07□□□□□ -1.76
NEK3P51956 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.07□□□□□ -1.76
NEK3P51956 AC087588.1-201ENST00000462203 316 ntBASIC4.07□□□□□ -1.76
NEK3P51956 AC084357.1-201ENST00000473404 255 ntBASIC4.07□□□□□ -1.76
NEK3P51956 RPL32P34-201ENST00000486380 400 ntBASIC4.07□□□□□ -1.76
NEK3P51956 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.07□□□□□ -1.76
NEK3P51956 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NEK3P51956 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.07□□□□□ -1.76
NEK3P51956 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.07□□□□□ -1.76
NEK3P51956 RNU6-1282P-201ENST00000516735 96 ntBASIC4.07□□□□□ -1.76
NEK3P51956 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.07□□□□□ -1.76
NEK3P51956 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.07□□□□□ -1.76
NEK3P51956 AC120057.2-201ENST00000571520 271 ntBASIC4.07□□□□□ -1.76
NEK3P51956 AC002545.1-201ENST00000592511 181 ntBASIC4.07□□□□□ -1.76
NEK3P51956 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.07□□□□□ -1.76
NEK3P51956 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.07□□□□□ -1.76
NEK3P51956 AC013553.2-201ENST00000604244 589 ntBASIC4.07□□□□□ -1.76
NEK3P51956 NDUFA8P1-201ENST00000605525 367 ntBASIC4.07□□□□□ -1.76
NEK3P51956 MIR6868-201ENST00000611215 58 ntBASIC4.07□□□□□ -1.76
NEK3P51956 AC022336.2-201ENST00000568966 2538 ntBASIC4.07□□□□□ -1.76
NEK3P51956 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NEK3P51956 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NEK3P51956 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
NEK3P51956 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.06□□□□□ -1.76
NEK3P51956 FAM35BP-202ENST00000497389 3337 ntBASIC4.06□□□□□ -1.76
NEK3P51956 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NEK3P51956 IPO8P1-201ENST00000455509 3109 ntBASIC4.06□□□□□ -1.76
NEK3P51956 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
NEK3P51956 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.06□□□□□ -1.76
NEK3P51956 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NEK3P51956 SNORD56.2-201ENST00000363242 71 ntBASIC4.06□□□□□ -1.76
NEK3P51956 Y_RNA.318-201ENST00000365131 97 ntBASIC4.06□□□□□ -1.76
NEK3P51956 Y_RNA.559-201ENST00000384686 107 ntBASIC4.06□□□□□ -1.76
NEK3P51956 RPS4XP3-201ENST00000398541 413 ntBASIC4.06□□□□□ -1.76
NEK3P51956 VN1R108P-201ENST00000431580 830 ntBASIC4.06□□□□□ -1.76
NEK3P51956 RPL36AP6-201ENST00000435770 321 ntBASIC4.06□□□□□ -1.76
NEK3P51956 HMGN2P20-201ENST00000437531 273 ntBASIC4.06□□□□□ -1.76
NEK3P51956 RPS24P1-201ENST00000438550 371 ntBASIC4.06□□□□□ -1.76
NEK3P51956 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.06□□□□□ -1.76
NEK3P51956 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.06□□□□□ -1.76
NEK3P51956 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.06□□□□□ -1.76
NEK3P51956 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.06□□□□□ -1.76
NEK3P51956 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.06□□□□□ -1.76
NEK3P51956 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.06□□□□□ -1.76
NEK3P51956 RPL23AP62-201ENST00000463396 453 ntBASIC4.06□□□□□ -1.76
NEK3P51956 AC023598.1-201ENST00000472521 361 ntBASIC4.06□□□□□ -1.76
NEK3P51956 RN7SL132P-201ENST00000478131 296 ntBASIC4.06□□□□□ -1.76
NEK3P51956 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.06□□□□□ -1.76
NEK3P51956 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.06□□□□□ -1.76
NEK3P51956 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.06□□□□□ -1.76
NEK3P51956 RNU6-405P-201ENST00000516637 110 ntBASIC4.06□□□□□ -1.76
NEK3P51956 RNU6-1092P-201ENST00000516955 87 ntBASIC4.06□□□□□ -1.76
NEK3P51956 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.06□□□□□ -1.76
NEK3P51956 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.06□□□□□ -1.76
NEK3P51956 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.06□□□□□ -1.76
NEK3P51956 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.06□□□□□ -1.76
NEK3P51956 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.06□□□□□ -1.76
NEK3P51956 HMGB1P14-201ENST00000557424 591 ntBASIC4.06□□□□□ -1.76
NEK3P51956 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.06□□□□□ -1.76
NEK3P51956 RPL21P12-201ENST00000559810 515 ntBASIC4.06□□□□□ -1.76
NEK3P51956 AC012213.3-201ENST00000577199 777 ntBASIC4.06□□□□□ -1.76
NEK3P51956 MIR3913-1-201ENST00000577744 102 ntBASIC4.06□□□□□ -1.76
NEK3P51956 RN7SL703P-201ENST00000578485 302 ntBASIC4.06□□□□□ -1.76
NEK3P51956 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.06□□□□□ -1.76
NEK3P51956 AC015871.2-201ENST00000603605 948 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms