Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF144AP50876 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RNF144AP50876 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF144AP50876 MRPS18CP4-201ENST00000535821 231 ntBASIC5.29□□□□□ -1.56
RNF144AP50876 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.29□□□□□ -1.56
RNF144AP50876 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.29□□□□□ -1.56
RNF144AP50876 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF144AP50876 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF144AP50876 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF144AP50876 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF144AP50876 AL162424.1-201ENST00000602325 221 ntBASIC5.29□□□□□ -1.56
RNF144AP50876 RNU6-6P-201ENST00000606623 107 ntBASIC5.29□□□□□ -1.56
RNF144AP50876 RMST_4.1-201ENST00000616886 107 ntBASIC5.29□□□□□ -1.56
RNF144AP50876 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.29□□□□□ -1.56
RNF144AP50876 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RNF144AP50876 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.29□□□□□ -1.56
RNF144AP50876 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RNF144AP50876 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF144AP50876 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RNF144AP50876 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RNF144AP50876 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.29□□□□□ -1.56
RNF144AP50876 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF144AP50876 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.29□□□□□ -1.56
RNF144AP50876 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.29□□□□□ -1.56
RNF144AP50876 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF144AP50876 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RNF144AP50876 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
RNF144AP50876 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF144AP50876 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RNF144AP50876 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
RNF144AP50876 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.28□□□□□ -1.56
RNF144AP50876 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNF144AP50876 AL159987.1-201ENST00000347911 293 ntBASIC5.28□□□□□ -1.56
RNF144AP50876 RNU1-150P-201ENST00000362491 162 ntBASIC5.28□□□□□ -1.56
RNF144AP50876 RNU1-146P-201ENST00000364015 165 ntBASIC5.28□□□□□ -1.56
RNF144AP50876 Y_RNA.233-201ENST00000364407 101 ntBASIC5.28□□□□□ -1.56
RNF144AP50876 Y_RNA.240-201ENST00000364469 95 ntBASIC5.28□□□□□ -1.56
RNF144AP50876 RNU6-827P-201ENST00000365553 106 ntBASIC5.28□□□□□ -1.56
RNF144AP50876 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF144AP50876 RNU6-1035P-201ENST00000384477 107 ntBASIC5.28□□□□□ -1.56
RNF144AP50876 MIR130A-201ENST00000385274 89 ntBASIC5.28□□□□□ -1.56
RNF144AP50876 RNU2-50P-201ENST00000410494 143 ntBASIC5.28□□□□□ -1.56
RNF144AP50876 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF144AP50876 SSXP9-201ENST00000417503 292 ntBASIC5.28□□□□□ -1.56
RNF144AP50876 AC140479.3-201ENST00000418944 1126 ntBASIC5.28□□□□□ -1.56
RNF144AP50876 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.28□□□□□ -1.56
RNF144AP50876 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.28□□□□□ -1.56
RNF144AP50876 HSPE1P25-201ENST00000455484 251 ntBASIC5.28□□□□□ -1.56
RNF144AP50876 AL122020.1-201ENST00000472287 459 ntBASIC5.28□□□□□ -1.56
RNF144AP50876 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.28□□□□□ -1.56
RNF144AP50876 Y_RNA.706-201ENST00000516933 99 ntBASIC5.28□□□□□ -1.56
RNF144AP50876 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF144AP50876 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNF144AP50876 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.28□□□□□ -1.56
RNF144AP50876 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
RNF144AP50876 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.28□□□□□ -1.56
RNF144AP50876 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF144AP50876 PABPC1P6-201ENST00000445594 1829 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
RNF144AP50876 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF144AP50876 STX3-208ENST00000641815 3236 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 AC100778.3-201ENST00000580060 1750 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 AC139769.1-204ENST00000472297 1931 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.27□□□□□ -1.57
RNF144AP50876 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF144AP50876 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
RNF144AP50876 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF144AP50876 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RNF144AP50876 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF144AP50876 SNORA64.1-201ENST00000362600 132 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 RN7SKP185-201ENST00000362813 326 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 GLULP6-201ENST00000399502 913 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 RNU2-43P-201ENST00000410306 190 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 RNA5SP296-201ENST00000410523 111 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 RPS3P2-201ENST00000421346 701 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RNF144AP50876 AC093414.1-201ENST00000434712 514 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 EIF5AP4-201ENST00000441206 465 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 AL591623.2-201ENST00000449978 222 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF144AP50876 RPS23P6-201ENST00000466136 431 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 AC022493.1-201ENST00000492984 337 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 AL671862.1-201ENST00000515851 349 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 Y_RNA.679-201ENST00000516416 91 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.27□□□□□ -1.57
RNF144AP50876 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.27□□□□□ -1.57
RNF144AP50876 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF144AP50876 AP006245.1-201ENST00000522549 120 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 RPL21P7-201ENST00000557463 483 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 AC096996.1-201ENST00000563813 325 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF144AP50876 MIR4659A-201ENST00000580269 81 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 AC008814.1-201ENST00000603797 406 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 AP000787.2-201ENST00000604432 568 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF144AP50876 AC011476.5-201ENST00000615594 130 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 MIR6778-201ENST00000617912 73 ntBASIC5.27□□□□□ -1.57
RNF144AP50876 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RNF144AP50876 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.27□□□□□ -1.57
RNF144AP50876 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms