Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AC105185.1-201ENST00000518705 535 ntBASIC3.07□□□□□ -1.92
TNFRSF4P43489 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.07□□□□□ -1.92
TNFRSF4P43489 AP003461.1-201ENST00000528866 78 ntBASIC3.07□□□□□ -1.92
TNFRSF4P43489 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.07□□□□□ -1.92
TNFRSF4P43489 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.07□□□□□ -1.92
TNFRSF4P43489 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.07□□□□□ -1.92
TNFRSF4P43489 AC145350.1-201ENST00000567426 208 ntBASIC3.07□□□□□ -1.92
TNFRSF4P43489 AC105224.1-201ENST00000587055 421 ntBASIC3.07□□□□□ -1.92
TNFRSF4P43489 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.07□□□□□ -1.92
TNFRSF4P43489 AC021171.1-201ENST00000603137 706 ntBASIC3.07□□□□□ -1.92
TNFRSF4P43489 AL353778.1-201ENST00000603149 408 ntBASIC3.07□□□□□ -1.92
TNFRSF4P43489 AC006023.1-201ENST00000603944 259 ntBASIC3.07□□□□□ -1.92
TNFRSF4P43489 RNU6-88P-201ENST00000606801 100 ntBASIC3.07□□□□□ -1.92
TNFRSF4P43489 OR2AS2P-201ENST00000606902 342 ntBASIC3.07□□□□□ -1.92
TNFRSF4P43489 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.07□□□□□ -1.92
TNFRSF4P43489 AL136981.2-201ENST00000617319 734 ntBASIC3.07□□□□□ -1.92
TNFRSF4P43489 AC008443.7-201ENST00000622195 246 ntBASIC3.07□□□□□ -1.92
TNFRSF4P43489 AC007998.5-201ENST00000622938 237 ntBASIC3.07□□□□□ -1.92
TNFRSF4P43489 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.07□□□□□ -1.92
TNFRSF4P43489 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TNFRSF4P43489 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TNFRSF4P43489 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.07□□□□□ -1.92
TNFRSF4P43489 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.07□□□□□ -1.92
TNFRSF4P43489 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.07□□□□□ -1.92
TNFRSF4P43489 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TNFRSF4P43489 AC096644.4-201ENST00000563417 2912 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 RNU6-462P-201ENST00000362659 105 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 SNORD113-6-201ENST00000363345 75 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 RNU6-1078P-201ENST00000364522 103 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 RNU6-744P-201ENST00000365557 107 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TNFRSF4P43489 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TNFRSF4P43489 RNU6-1316P-201ENST00000384242 108 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 RPS3AP26-201ENST00000398259 784 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 MIR320C1-201ENST00000408566 88 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.06□□□□□ -1.92
TNFRSF4P43489 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.06□□□□□ -1.92
TNFRSF4P43489 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.06□□□□□ -1.92
TNFRSF4P43489 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.06□□□□□ -1.92
TNFRSF4P43489 BX119904.4-201ENST00000424402 301 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TNFRSF4P43489 ARF4P2-201ENST00000430209 526 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 AL365396.1-201ENST00000430854 671 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 OR4K11P-201ENST00000431829 904 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.06□□□□□ -1.92
TNFRSF4P43489 ISCA1P2-201ENST00000438679 421 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 RPL26P6-201ENST00000440913 438 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.06□□□□□ -1.92
TNFRSF4P43489 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.06□□□□□ -1.92
TNFRSF4P43489 RPL23AP35-201ENST00000451906 501 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 AL136097.1-201ENST00000456945 913 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.06□□□□□ -1.92
TNFRSF4P43489 RNU7-170P-201ENST00000459303 61 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 AC117440.1-201ENST00000474107 571 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 HMGN2P13-201ENST00000476476 274 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 AC021382.1-201ENST00000483523 359 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.06□□□□□ -1.92
TNFRSF4P43489 AP001025.2-201ENST00000490908 477 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TNFRSF4P43489 AC114967.1-201ENST00000504890 259 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
TNFRSF4P43489 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TNFRSF4P43489 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.06□□□□□ -1.92
TNFRSF4P43489 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.06□□□□□ -1.92
TNFRSF4P43489 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
TNFRSF4P43489 AC021755.1-201ENST00000559747 1447 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.06□□□□□ -1.92
TNFRSF4P43489 AC008751.2-201ENST00000597885 980 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 CLIC4P2-201ENST00000601934 717 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 RPL12P50-201ENST00000603116 116 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 MIR6076-201ENST00000617521 113 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 AC131159.1-201ENST00000621854 213 ntBASIC3.06□□□□□ -1.92
TNFRSF4P43489 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.06□□□□□ -1.92
TNFRSF4P43489 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TNFRSF4P43489 HSPA8P1-201ENST00000425843 1833 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
TNFRSF4P43489 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TNFRSF4P43489 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TNFRSF4P43489 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.05□□□□□ -1.92
TNFRSF4P43489 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TNFRSF4P43489 RNU5A-1-201ENST00000362698 116 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 RNU6-76P-201ENST00000384060 104 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 Y_RNA.548-201ENST00000384656 105 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 RPS4XP3-201ENST00000398541 413 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 TXNL1P1-201ENST00000429528 554 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 HIGD1AP11-201ENST00000438361 280 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 AL354941.1-201ENST00000438600 464 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 AC093156.1-201ENST00000440382 670 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.05□□□□□ -1.92
TNFRSF4P43489 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.05□□□□□ -1.92
TNFRSF4P43489 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.05□□□□□ -1.92
TNFRSF4P43489 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.05□□□□□ -1.92
TNFRSF4P43489 ARPC3P2-201ENST00000457786 533 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 RPS29P26-201ENST00000477483 171 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 HMGB1P36-201ENST00000487709 576 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.05□□□□□ -1.92
TNFRSF4P43489 AC109464.2-201ENST00000510242 943 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 MTCYBP43-201ENST00000513621 740 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 SCGB1D5P-201ENST00000515134 247 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms