Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC026427.2-201ENST00000506228 536 ntBASIC2.87□□□□□ -1.95
SSR1P43307 AC017037.2-201ENST00000513850 890 ntBASIC2.87□□□□□ -1.95
SSR1P43307 RNY4P37-201ENST00000516225 96 ntBASIC2.87□□□□□ -1.95
SSR1P43307 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.87□□□□□ -1.95
SSR1P43307 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.87□□□□□ -1.95
SSR1P43307 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.87□□□□□ -1.95
SSR1P43307 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.87□□□□□ -1.95
SSR1P43307 MIR3117-201ENST00000584034 78 ntBASIC2.87□□□□□ -1.95
SSR1P43307 AC015688.2-201ENST00000584523 262 ntBASIC2.87□□□□□ -1.95
SSR1P43307 AL645944.1-201ENST00000603857 493 ntBASIC2.87□□□□□ -1.95
SSR1P43307 AC008277.2-201ENST00000605196 797 ntBASIC2.87□□□□□ -1.95
SSR1P43307 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SSR1P43307 AC097504.2-201ENST00000608088 454 ntBASIC2.87□□□□□ -1.95
SSR1P43307 AC025588.4-201ENST00000615802 908 ntBASIC2.87□□□□□ -1.95
SSR1P43307 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.87□□□□□ -1.95
SSR1P43307 AC090772.4-201ENST00000623599 362 ntBASIC2.87□□□□□ -1.95
SSR1P43307 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SSR1P43307 AC009902.3-201ENST00000606235 2172 ntBASIC2.87□□□□□ -1.95
SSR1P43307 AL365361.1-201ENST00000566942 3481 ntBASIC2.87□□□□□ -1.95
SSR1P43307 TAB3P1-202ENST00000452645 1634 ntBASIC2.86□□□□□ -1.95
SSR1P43307 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.86□□□□□ -1.95
SSR1P43307 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.86□□□□□ -1.95
SSR1P43307 GNG5P1-201ENST00000255500 204 ntBASIC2.86□□□□□ -1.95
SSR1P43307 MIR208A-201ENST00000362287 71 ntBASIC2.86□□□□□ -1.95
SSR1P43307 snoZ40.1-201ENST00000364540 72 ntBASIC2.86□□□□□ -1.95
SSR1P43307 SNORA48.5-201ENST00000391143 135 ntBASIC2.86□□□□□ -1.95
SSR1P43307 UBA52P6-201ENST00000399822 382 ntBASIC2.86□□□□□ -1.95
SSR1P43307 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.86□□□□□ -1.95
SSR1P43307 SNORA11-201ENST00000408789 128 ntBASIC2.86□□□□□ -1.95
SSR1P43307 RNU4-72P-201ENST00000410754 173 ntBASIC2.86□□□□□ -1.95
SSR1P43307 AL513331.1-201ENST00000411908 397 ntBASIC2.86□□□□□ -1.95
SSR1P43307 OR4K6P-201ENST00000416478 897 ntBASIC2.86□□□□□ -1.95
SSR1P43307 NDUFB4P6-201ENST00000436819 366 ntBASIC2.86□□□□□ -1.95
SSR1P43307 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.86□□□□□ -1.95
SSR1P43307 RPL26P6-201ENST00000440913 438 ntBASIC2.86□□□□□ -1.95
SSR1P43307 AC104389.3-201ENST00000445629 235 ntBASIC2.86□□□□□ -1.95
SSR1P43307 IFNA11P-201ENST00000446352 526 ntBASIC2.86□□□□□ -1.95
SSR1P43307 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
SSR1P43307 PNPLA4P1-201ENST00000458328 305 ntBASIC2.86□□□□□ -1.95
SSR1P43307 RNU6-1028P-201ENST00000517164 93 ntBASIC2.86□□□□□ -1.95
SSR1P43307 AP003102.1-201ENST00000525638 661 ntBASIC2.86□□□□□ -1.95
SSR1P43307 DEFB130C-202ENST00000530001 230 ntBASIC2.86□□□□□ -1.95
SSR1P43307 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.86□□□□□ -1.95
SSR1P43307 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.86□□□□□ -1.95
SSR1P43307 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.86□□□□□ -1.95
SSR1P43307 AC060766.3-201ENST00000591442 263 ntBASIC2.86□□□□□ -1.95
SSR1P43307 RPS15AP11-201ENST00000594193 385 ntBASIC2.86□□□□□ -1.95
SSR1P43307 BNIP3P33-201ENST00000598912 569 ntBASIC2.86□□□□□ -1.95
SSR1P43307 AC013444.2-201ENST00000603317 787 ntBASIC2.86□□□□□ -1.95
SSR1P43307 RPL23AP92-201ENST00000603609 255 ntBASIC2.86□□□□□ -1.95
SSR1P43307 AL356280.1-201ENST00000603614 379 ntBASIC2.86□□□□□ -1.95
SSR1P43307 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.86□□□□□ -1.95
SSR1P43307 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.86□□□□□ -1.95
SSR1P43307 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.86□□□□□ -1.95
SSR1P43307 UCA1.1-201ENST00000620952 75 ntBASIC2.86□□□□□ -1.95
SSR1P43307 MIR203B-201ENST00000636080 86 ntBASIC2.86□□□□□ -1.95
SSR1P43307 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.86□□□□□ -1.95
SSR1P43307 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
SSR1P43307 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.86□□□□□ -1.95
SSR1P43307 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.85□□□□□ -1.95
SSR1P43307 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
SSR1P43307 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SSR1P43307 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SSR1P43307 RNU6-224P-201ENST00000384055 107 ntBASIC2.85□□□□□ -1.95
SSR1P43307 RNA5SP181-201ENST00000410246 98 ntBASIC2.85□□□□□ -1.95
SSR1P43307 AC068533.2-201ENST00000411872 306 ntBASIC2.85□□□□□ -1.95
SSR1P43307 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.85□□□□□ -1.95
SSR1P43307 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.85□□□□□ -1.95
SSR1P43307 EZH2P1-201ENST00000431167 291 ntBASIC2.85□□□□□ -1.95
SSR1P43307 AL139132.1-201ENST00000431587 344 ntBASIC2.85□□□□□ -1.95
SSR1P43307 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.85□□□□□ -1.95
SSR1P43307 AC087499.2-201ENST00000432861 149 ntBASIC2.85□□□□□ -1.95
SSR1P43307 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.85□□□□□ -1.95
SSR1P43307 RPL23AP74-201ENST00000437246 471 ntBASIC2.85□□□□□ -1.95
SSR1P43307 PGBD4P3-201ENST00000440731 581 ntBASIC2.85□□□□□ -1.95
SSR1P43307 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.85□□□□□ -1.95
SSR1P43307 AC233279.1-201ENST00000455300 423 ntBASIC2.85□□□□□ -1.95
SSR1P43307 RNU7-26P-201ENST00000458980 63 ntBASIC2.85□□□□□ -1.95
SSR1P43307 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.85□□□□□ -1.95
SSR1P43307 AC016550.1-201ENST00000505348 785 ntBASIC2.85□□□□□ -1.95
SSR1P43307 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.85□□□□□ -1.95
SSR1P43307 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.85□□□□□ -1.95
SSR1P43307 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.85□□□□□ -1.95
SSR1P43307 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.85□□□□□ -1.95
SSR1P43307 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.85□□□□□ -1.95
SSR1P43307 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.85□□□□□ -1.95
SSR1P43307 CYCSP39-201ENST00000565821 309 ntBASIC2.85□□□□□ -1.95
SSR1P43307 AC009127.3-201ENST00000570531 403 ntBASIC2.85□□□□□ -1.95
SSR1P43307 AC126365.2-201ENST00000580630 379 ntBASIC2.85□□□□□ -1.95
SSR1P43307 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.85□□□□□ -1.95
SSR1P43307 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.85□□□□□ -1.95
SSR1P43307 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.85□□□□□ -1.95
SSR1P43307 AL035411.2-201ENST00000604022 421 ntBASIC2.85□□□□□ -1.95
SSR1P43307 AC004853.1-201ENST00000604902 698 ntBASIC2.85□□□□□ -1.95
SSR1P43307 AC092574.1-201ENST00000609771 420 ntBASIC2.85□□□□□ -1.95
SSR1P43307 AC005332.6-201ENST00000613178 446 ntBASIC2.85□□□□□ -1.95
SSR1P43307 HMGB1P24-202ENST00000615653 685 ntBASIC2.85□□□□□ -1.95
SSR1P43307 AC253576.2-201ENST00000618815 580 ntBASIC2.85□□□□□ -1.95
SSR1P43307 AL137790.1-201ENST00000634283 177 ntBASIC2.85□□□□□ -1.95
SSR1P43307 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms