Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 RNA5SP337-201ENST00000517007 109 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 IGKV2D-23-201ENST00000518179 286 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.34□□□□□ -1.87
APOBEC1P41238 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.34□□□□□ -1.87
APOBEC1P41238 AC008489.1-201ENST00000524271 483 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
APOBEC1P41238 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.34□□□□□ -1.87
APOBEC1P41238 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.34□□□□□ -1.87
APOBEC1P41238 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.34□□□□□ -1.87
APOBEC1P41238 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.34□□□□□ -1.87
APOBEC1P41238 AC093227.2-201ENST00000589357 285 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.34□□□□□ -1.87
APOBEC1P41238 KLKP1-201ENST00000595979 403 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 AC013562.2-201ENST00000611632 603 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.34□□□□□ -1.87
APOBEC1P41238 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
APOBEC1P41238 AL732618.1-201ENST00000623251 301 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.34□□□□□ -1.87
APOBEC1P41238 AC095031.1-201ENST00000623685 672 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 AL732372.2-225ENST00000642124 456 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 RPS4XP5-202ENST00000449995 1334 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
APOBEC1P41238 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
APOBEC1P41238 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBEC1P41238 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
APOBEC1P41238 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBEC1P41238 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.33□□□□□ -1.88
APOBEC1P41238 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
APOBEC1P41238 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
APOBEC1P41238 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
APOBEC1P41238 SNORA23-201ENST00000365128 182 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 SNORA20.2-201ENST00000383922 131 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
APOBEC1P41238 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
APOBEC1P41238 AL590704.1-201ENST00000402856 794 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 MTHFD2P2-201ENST00000407725 247 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.33□□□□□ -1.88
APOBEC1P41238 RPL21P24-201ENST00000413752 448 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
APOBEC1P41238 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.33□□□□□ -1.88
APOBEC1P41238 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.33□□□□□ -1.88
APOBEC1P41238 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.33□□□□□ -1.88
APOBEC1P41238 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
APOBEC1P41238 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.33□□□□□ -1.88
APOBEC1P41238 AC005094.1-201ENST00000440420 368 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 MTCO3P45-201ENST00000443036 613 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 AL359385.1-201ENST00000456509 365 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.33□□□□□ -1.88
APOBEC1P41238 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.33□□□□□ -1.88
APOBEC1P41238 AL049714.1-201ENST00000466686 347 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 RPS3AP17-201ENST00000472594 777 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
APOBEC1P41238 AC108860.1-201ENST00000484521 383 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.33□□□□□ -1.88
APOBEC1P41238 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.33□□□□□ -1.88
APOBEC1P41238 HMGN1P11-201ENST00000508668 303 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 AC114797.1-201ENST00000514003 728 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 MTND4LP31-201ENST00000514859 294 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 SNORA31.8-201ENST00000516327 108 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 RN7SKP244-201ENST00000516513 307 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 RNU6-64P-201ENST00000517119 105 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
APOBEC1P41238 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.33□□□□□ -1.88
APOBEC1P41238 ERHP1-201ENST00000523006 310 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.33□□□□□ -1.88
APOBEC1P41238 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
APOBEC1P41238 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.33□□□□□ -1.88
APOBEC1P41238 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.33□□□□□ -1.88
APOBEC1P41238 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.33□□□□□ -1.88
APOBEC1P41238 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.33□□□□□ -1.88
APOBEC1P41238 AC087883.1-201ENST00000551882 391 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.33□□□□□ -1.88
APOBEC1P41238 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.33□□□□□ -1.88
APOBEC1P41238 AC006116.10-201ENST00000591836 581 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 AC110741.2-201ENST00000605278 268 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 AC008121.2-201ENST00000614647 523 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 AL136313.1-201ENST00000624804 202 ntBASIC3.33□□□□□ -1.88
APOBEC1P41238 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBEC1P41238 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
APOBEC1P41238 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.33□□□□□ -1.88
APOBEC1P41238 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.33□□□□□ -1.88
APOBEC1P41238 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
APOBEC1P41238 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.32□□□□□ -1.88
APOBEC1P41238 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
APOBEC1P41238 DEFB108F-201ENST00000344638 222 ntBASIC3.32□□□□□ -1.88
APOBEC1P41238 U3.11-201ENST00000364476 212 ntBASIC3.32□□□□□ -1.88
APOBEC1P41238 RNU1-64P-201ENST00000365443 163 ntBASIC3.32□□□□□ -1.88
APOBEC1P41238 Y_RNA.505-201ENST00000384489 102 ntBASIC3.32□□□□□ -1.88
APOBEC1P41238 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
APOBEC1P41238 SOD2P1-201ENST00000396543 562 ntBASIC3.32□□□□□ -1.88
APOBEC1P41238 TXNP7-201ENST00000406296 293 ntBASIC3.32□□□□□ -1.88
APOBEC1P41238 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.32□□□□□ -1.88
APOBEC1P41238 MTND3P17-201ENST00000416968 344 ntBASIC3.32□□□□□ -1.88
APOBEC1P41238 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.32□□□□□ -1.88
APOBEC1P41238 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.32□□□□□ -1.88
APOBEC1P41238 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.32□□□□□ -1.88
APOBEC1P41238 RPL31P35-201ENST00000431058 377 ntBASIC3.32□□□□□ -1.88
APOBEC1P41238 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.32□□□□□ -1.88
APOBEC1P41238 RPL26P6-201ENST00000440913 438 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms