Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFX1P22670 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFX1P22670 AL022322.2-201ENST00000624072 20397 ntBASIC5.67□□□□□ -1.5
RFX1P22670 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RFX1P22670 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFX1P22670 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFX1P22670 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
RFX1P22670 RNU6-335P-201ENST00000364563 113 ntBASIC5.67□□□□□ -1.5
RFX1P22670 Y_RNA.473-201ENST00000384333 102 ntBASIC5.67□□□□□ -1.5
RFX1P22670 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
RFX1P22670 RN7SKP126-201ENST00000411143 300 ntBASIC5.67□□□□□ -1.5
RFX1P22670 RNU6-607P-201ENST00000411283 108 ntBASIC5.67□□□□□ -1.5
RFX1P22670 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.67□□□□□ -1.5
RFX1P22670 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.67□□□□□ -1.5
RFX1P22670 AC236972.1-201ENST00000433225 199 ntBASIC5.67□□□□□ -1.5
RFX1P22670 SNRPEP4-201ENST00000435815 279 ntBASIC5.67□□□□□ -1.5
RFX1P22670 PSMD10P3-201ENST00000437000 448 ntBASIC5.67□□□□□ -1.5
RFX1P22670 AC104634.1-201ENST00000452720 462 ntBASIC5.67□□□□□ -1.5
RFX1P22670 MLLT10P2-201ENST00000506434 249 ntBASIC5.67□□□□□ -1.5
RFX1P22670 SNORA25.10-201ENST00000515926 124 ntBASIC5.67□□□□□ -1.5
RFX1P22670 SNORA31.20-201ENST00000517111 133 ntBASIC5.67□□□□□ -1.5
RFX1P22670 RN7SKP147-201ENST00000517154 244 ntBASIC5.67□□□□□ -1.5
RFX1P22670 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFX1P22670 AC025423.5-201ENST00000550230 219 ntBASIC5.67□□□□□ -1.5
RFX1P22670 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFX1P22670 AC002044.1-201ENST00000606707 158 ntBASIC5.67□□□□□ -1.5
RFX1P22670 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFX1P22670 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
RFX1P22670 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.67□□□□□ -1.5
RFX1P22670 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RFX1P22670 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFX1P22670 AC005183.1-201ENST00000603687 1979 ntBASIC5.67□□□□□ -1.5
RFX1P22670 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFX1P22670 ZNF285B-201ENST00000561698 1767 ntBASIC5.67□□□□□ -1.5
RFX1P22670 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFX1P22670 MAPK10-338ENST00000641647 3362 ntBASIC5.67□□□□□ -1.5
RFX1P22670 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFX1P22670 PNPT1P2-201ENST00000456768 2050 ntBASIC5.67□□□□□ -1.5
RFX1P22670 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.66□□□□□ -1.5
RFX1P22670 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFX1P22670 RNU6-574P-201ENST00000384265 107 ntBASIC5.66□□□□□ -1.5
RFX1P22670 MIR124-3-201ENST00000384866 87 ntBASIC5.66□□□□□ -1.5
RFX1P22670 MIR105-1-201ENST00000385222 81 ntBASIC5.66□□□□□ -1.5
RFX1P22670 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.66□□□□□ -1.5
RFX1P22670 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.66□□□□□ -1.5
RFX1P22670 NOTCH2P1-201ENST00000443481 624 ntBASIC5.66□□□□□ -1.5
RFX1P22670 HSFY6P-201ENST00000445573 403 ntBASIC5.66□□□□□ -1.5
RFX1P22670 ARL2BPP10-201ENST00000446487 531 ntBASIC5.66□□□□□ -1.5
RFX1P22670 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.66□□□□□ -1.5
RFX1P22670 AC108860.1-201ENST00000484521 383 ntBASIC5.66□□□□□ -1.5
RFX1P22670 AC008716.1-201ENST00000511084 513 ntBASIC5.66□□□□□ -1.5
RFX1P22670 AC092436.3-201ENST00000511788 257 ntBASIC5.66□□□□□ -1.5
RFX1P22670 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.66□□□□□ -1.5
RFX1P22670 AP003122.3-201ENST00000526316 255 ntBASIC5.66□□□□□ -1.5
RFX1P22670 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.66□□□□□ -1.5
RFX1P22670 AC105254.2-201ENST00000603636 436 ntBASIC5.66□□□□□ -1.5
RFX1P22670 AL161423.1-201ENST00000613700 262 ntBASIC5.66□□□□□ -1.5
RFX1P22670 AC131238.1-201ENST00000617135 328 ntBASIC5.66□□□□□ -1.5
RFX1P22670 AL031601.2-202ENST00000622650 282 ntBASIC5.66□□□□□ -1.5
RFX1P22670 AC138305.3-201ENST00000624988 240 ntBASIC5.66□□□□□ -1.5
RFX1P22670 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.66□□□□□ -1.5
RFX1P22670 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFX1P22670 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RFX1P22670 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RFX1P22670 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.66□□□□□ -1.5
RFX1P22670 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFX1P22670 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFX1P22670 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
RFX1P22670 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.65□□□□□ -1.5
RFX1P22670 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RFX1P22670 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.65□□□□□ -1.5
RFX1P22670 UBE2L2-201ENST00000254302 429 ntBASIC5.65□□□□□ -1.5
RFX1P22670 RNU6-1303P-201ENST00000364841 107 ntBASIC5.65□□□□□ -1.5
RFX1P22670 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.65□□□□□ -1.5
RFX1P22670 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.65□□□□□ -1.5
RFX1P22670 AC063979.1-201ENST00000415539 377 ntBASIC5.65□□□□□ -1.5
RFX1P22670 AL353621.1-201ENST00000418219 243 ntBASIC5.65□□□□□ -1.5
RFX1P22670 AC009238.2-201ENST00000431026 355 ntBASIC5.65□□□□□ -1.5
RFX1P22670 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.65□□□□□ -1.5
RFX1P22670 BTF3P15-201ENST00000455606 336 ntBASIC5.65□□□□□ -1.5
RFX1P22670 RPL5P30-201ENST00000465511 891 ntBASIC5.65□□□□□ -1.5
RFX1P22670 AP000926.1-201ENST00000479573 241 ntBASIC5.65□□□□□ -1.5
RFX1P22670 AC092451.1-201ENST00000480211 153 ntBASIC5.65□□□□□ -1.5
RFX1P22670 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.65□□□□□ -1.5
RFX1P22670 HMGB1P22-201ENST00000505315 124 ntBASIC5.65□□□□□ -1.5
RFX1P22670 RNU6-470P-201ENST00000515954 104 ntBASIC5.65□□□□□ -1.5
RFX1P22670 RAB9BP1-201ENST00000519581 626 ntBASIC5.65□□□□□ -1.5
RFX1P22670 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.65□□□□□ -1.5
RFX1P22670 AL359219.2-201ENST00000555184 348 ntBASIC5.65□□□□□ -1.5
RFX1P22670 MIR3921-201ENST00000577308 85 ntBASIC5.65□□□□□ -1.5
RFX1P22670 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RFX1P22670 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.65□□□□□ -1.5
RFX1P22670 AC007485.1-201ENST00000616755 206 ntBASIC5.65□□□□□ -1.5
RFX1P22670 AL360181.4-201ENST00000621752 134 ntBASIC5.65□□□□□ -1.5
RFX1P22670 AL732372.2-225ENST00000642124 456 ntBASIC5.65□□□□□ -1.5
RFX1P22670 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
RFX1P22670 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
RFX1P22670 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RFX1P22670 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RFX1P22670 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms