Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL592114.1-201ENST00000403842 483 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 AL356432.1-201ENST00000405809 419 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.38□□□□□ -1.55
ERCC3P19447 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.38□□□□□ -1.55
ERCC3P19447 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.38□□□□□ -1.55
ERCC3P19447 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.38□□□□□ -1.55
ERCC3P19447 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.38□□□□□ -1.55
ERCC3P19447 AC104058.1-201ENST00000448028 297 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 AC010618.1-201ENST00000469924 477 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ERCC3P19447 AC103851.1-201ENST00000506833 274 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC5.38□□□□□ -1.55
ERCC3P19447 AL359273.1-201ENST00000510918 627 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 RN7SKP21-201ENST00000516503 220 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 RNU6-273P-201ENST00000516937 96 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.38□□□□□ -1.55
ERCC3P19447 MYL12AP1-201ENST00000518490 515 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.38□□□□□ -1.55
ERCC3P19447 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.38□□□□□ -1.55
ERCC3P19447 AC135001.1-201ENST00000544546 283 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 AL118558.2-201ENST00000556294 238 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.38□□□□□ -1.55
ERCC3P19447 AC022968.1-201ENST00000567372 442 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.38□□□□□ -1.55
ERCC3P19447 AC023575.1-201ENST00000580510 358 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.38□□□□□ -1.55
ERCC3P19447 AC174048.1-201ENST00000603389 144 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 AC092747.3-201ENST00000603769 301 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 AC022893.3-201ENST00000607665 437 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 AL355810.1-201ENST00000614629 552 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 AL158196.1-201ENST00000616786 434 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.38□□□□□ -1.55
ERCC3P19447 C2orf27A-204ENST00000623058 969 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 AC011944.2-201ENST00000624440 683 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 U3.53-201ENST00000628922 216 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 MTND5P42-201ENST00000637720 498 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ERCC3P19447 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
ERCC3P19447 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ERCC3P19447 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
ERCC3P19447 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ERCC3P19447 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ERCC3P19447 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ERCC3P19447 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ERCC3P19447 Y_RNA.100-201ENST00000363141 102 ntBASIC5.37□□□□□ -1.55
ERCC3P19447 MIR514A1-201ENST00000385133 98 ntBASIC5.37□□□□□ -1.55
ERCC3P19447 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ERCC3P19447 RNU6-1148P-201ENST00000410992 104 ntBASIC5.37□□□□□ -1.55
ERCC3P19447 MTND3P8-201ENST00000412909 339 ntBASIC5.37□□□□□ -1.55
ERCC3P19447 AL451054.2-201ENST00000420896 202 ntBASIC5.37□□□□□ -1.55
ERCC3P19447 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.37□□□□□ -1.55
ERCC3P19447 TAAR7P-201ENST00000436141 242 ntBASIC5.37□□□□□ -1.55
ERCC3P19447 PRDX3P3-201ENST00000447765 522 ntBASIC5.37□□□□□ -1.55
ERCC3P19447 SNRPGP5-201ENST00000456003 220 ntBASIC5.37□□□□□ -1.55
ERCC3P19447 AC109327.1-201ENST00000471666 403 ntBASIC5.37□□□□□ -1.55
ERCC3P19447 AC098591.2-201ENST00000510152 315 ntBASIC5.37□□□□□ -1.55
ERCC3P19447 RNU6-685P-201ENST00000517088 95 ntBASIC5.37□□□□□ -1.55
ERCC3P19447 RN7SKP256-201ENST00000517201 314 ntBASIC5.37□□□□□ -1.55
ERCC3P19447 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.37□□□□□ -1.55
ERCC3P19447 AL121576.1-201ENST00000556055 276 ntBASIC5.37□□□□□ -1.55
ERCC3P19447 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.37□□□□□ -1.55
ERCC3P19447 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.37□□□□□ -1.55
ERCC3P19447 MIR4424-201ENST00000585257 86 ntBASIC5.37□□□□□ -1.55
ERCC3P19447 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ERCC3P19447 MIR6716-201ENST00000613413 80 ntBASIC5.37□□□□□ -1.55
ERCC3P19447 AC015914.2-201ENST00000618167 288 ntBASIC5.37□□□□□ -1.55
ERCC3P19447 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.37□□□□□ -1.55
ERCC3P19447 AC068724.3-201ENST00000625906 87 ntBASIC5.37□□□□□ -1.55
ERCC3P19447 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ERCC3P19447 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ERCC3P19447 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ERCC3P19447 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ERCC3P19447 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ERCC3P19447 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ERCC3P19447 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ERCC3P19447 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ERCC3P19447 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ERCC3P19447 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ERCC3P19447 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ERCC3P19447 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.36□□□□□ -1.55
ERCC3P19447 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.36□□□□□ -1.55
ERCC3P19447 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
ERCC3P19447 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ERCC3P19447 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ERCC3P19447 ZFRP1-201ENST00000457579 2970 ntBASIC5.36□□□□□ -1.55
ERCC3P19447 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
ERCC3P19447 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.36□□□□□ -1.55
ERCC3P19447 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ERCC3P19447 RN7SKP227-201ENST00000364445 330 ntBASIC5.36□□□□□ -1.55
ERCC3P19447 SNORA71.2-201ENST00000364941 134 ntBASIC5.36□□□□□ -1.55
ERCC3P19447 RNU6-14P-201ENST00000384630 106 ntBASIC5.36□□□□□ -1.55
ERCC3P19447 AL590762.2-201ENST00000395798 571 ntBASIC5.36□□□□□ -1.55
ERCC3P19447 BX842559.1-201ENST00000419615 532 ntBASIC5.36□□□□□ -1.55
ERCC3P19447 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC5.36□□□□□ -1.55
ERCC3P19447 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.36□□□□□ -1.55
ERCC3P19447 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.36□□□□□ -1.55
ERCC3P19447 PRPS1P1-201ENST00000445305 876 ntBASIC5.36□□□□□ -1.55
ERCC3P19447 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.36□□□□□ -1.55
ERCC3P19447 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.36□□□□□ -1.55
ERCC3P19447 CCDC34P1-201ENST00000507441 517 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms