Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.81□□□□□ -1.96
SDC1P18827 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
SDC1P18827 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SDC1P18827 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
SDC1P18827 MTCO1P9-201ENST00000505577 1534 ntBASIC2.8□□□□□ -1.96
SDC1P18827 AC104454.1-201ENST00000421341 1401 ntBASIC2.8□□□□□ -1.96
SDC1P18827 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.8□□□□□ -1.96
SDC1P18827 RNU6-853P-201ENST00000364306 107 ntBASIC2.8□□□□□ -1.96
SDC1P18827 RNA5SP72-201ENST00000364442 117 ntBASIC2.8□□□□□ -1.96
SDC1P18827 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SDC1P18827 MIR7-3-201ENST00000384898 110 ntBASIC2.8□□□□□ -1.96
SDC1P18827 MIR181B1-201ENST00000385240 110 ntBASIC2.8□□□□□ -1.96
SDC1P18827 MIR493-201ENST00000385254 89 ntBASIC2.8□□□□□ -1.96
SDC1P18827 RNA5SP344-201ENST00000411081 104 ntBASIC2.8□□□□□ -1.96
SDC1P18827 AC109780.2-201ENST00000413467 845 ntBASIC2.8□□□□□ -1.96
SDC1P18827 AC098592.1-201ENST00000419352 333 ntBASIC2.8□□□□□ -1.96
SDC1P18827 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.8□□□□□ -1.96
SDC1P18827 AC093151.1-201ENST00000427711 313 ntBASIC2.8□□□□□ -1.96
SDC1P18827 YME1L1P1-201ENST00000429435 297 ntBASIC2.8□□□□□ -1.96
SDC1P18827 MTND1P20-201ENST00000430341 950 ntBASIC2.8□□□□□ -1.96
SDC1P18827 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.8□□□□□ -1.96
SDC1P18827 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.8□□□□□ -1.96
SDC1P18827 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.8□□□□□ -1.96
SDC1P18827 AL008629.1-201ENST00000438615 184 ntBASIC2.8□□□□□ -1.96
SDC1P18827 RPL37P4-201ENST00000448908 268 ntBASIC2.8□□□□□ -1.96
SDC1P18827 AL162389.1-201ENST00000449233 177 ntBASIC2.8□□□□□ -1.96
SDC1P18827 AC104978.1-201ENST00000449387 391 ntBASIC2.8□□□□□ -1.96
SDC1P18827 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.8□□□□□ -1.96
SDC1P18827 PRSS3P4-201ENST00000453323 162 ntBASIC2.8□□□□□ -1.96
SDC1P18827 RPL32P34-201ENST00000486380 400 ntBASIC2.8□□□□□ -1.96
SDC1P18827 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.8□□□□□ -1.96
SDC1P18827 AC074250.1-201ENST00000511117 192 ntBASIC2.8□□□□□ -1.96
SDC1P18827 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.8□□□□□ -1.96
SDC1P18827 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SDC1P18827 AC026801.2-201ENST00000515352 425 ntBASIC2.8□□□□□ -1.96
SDC1P18827 SNORA3.4-201ENST00000515969 96 ntBASIC2.8□□□□□ -1.96
SDC1P18827 Y_RNA.717-201ENST00000517106 92 ntBASIC2.8□□□□□ -1.96
SDC1P18827 SNORA31.22-201ENST00000517204 135 ntBASIC2.8□□□□□ -1.96
SDC1P18827 FAM60DP-201ENST00000524174 632 ntBASIC2.8□□□□□ -1.96
SDC1P18827 OR5G4P-201ENST00000525251 760 ntBASIC2.8□□□□□ -1.96
SDC1P18827 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.8□□□□□ -1.96
SDC1P18827 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.8□□□□□ -1.96
SDC1P18827 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.8□□□□□ -1.96
SDC1P18827 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.8□□□□□ -1.96
SDC1P18827 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.8□□□□□ -1.96
SDC1P18827 UBE2L4-201ENST00000587688 464 ntBASIC2.8□□□□□ -1.96
SDC1P18827 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.8□□□□□ -1.96
SDC1P18827 AL109653.1-201ENST00000603091 248 ntBASIC2.8□□□□□ -1.96
SDC1P18827 AC021171.1-201ENST00000603137 706 ntBASIC2.8□□□□□ -1.96
SDC1P18827 AC015871.2-201ENST00000603605 948 ntBASIC2.8□□□□□ -1.96
SDC1P18827 AC018714.1-201ENST00000605028 208 ntBASIC2.8□□□□□ -1.96
SDC1P18827 AC097468.3-201ENST00000607956 456 ntBASIC2.8□□□□□ -1.96
SDC1P18827 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.8□□□□□ -1.96
SDC1P18827 AC072039.2-201ENST00000608883 439 ntBASIC2.8□□□□□ -1.96
SDC1P18827 AC063944.3-201ENST00000609969 533 ntBASIC2.8□□□□□ -1.96
SDC1P18827 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.8□□□□□ -1.96
SDC1P18827 AL020991.1-201ENST00000612314 373 ntBASIC2.8□□□□□ -1.96
SDC1P18827 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.8□□□□□ -1.96
SDC1P18827 AC008443.7-201ENST00000622195 246 ntBASIC2.8□□□□□ -1.96
SDC1P18827 AL158801.5-201ENST00000623123 465 ntBASIC2.8□□□□□ -1.96
SDC1P18827 AC017037.3-201ENST00000625016 472 ntBASIC2.8□□□□□ -1.96
SDC1P18827 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.8□□□□□ -1.96
SDC1P18827 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SDC1P18827 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SDC1P18827 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SDC1P18827 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SDC1P18827 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SDC1P18827 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.79□□□□□ -1.96
SDC1P18827 GABRG2-229ENST00000641017 3628 ntBASIC2.79□□□□□ -1.96
SDC1P18827 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SDC1P18827 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.79□□□□□ -1.96
SDC1P18827 RNU6-1078P-201ENST00000364522 103 ntBASIC2.79□□□□□ -1.96
SDC1P18827 AC119751.3-201ENST00000399720 670 ntBASIC2.79□□□□□ -1.96
SDC1P18827 MTCO1P17-201ENST00000411522 491 ntBASIC2.79□□□□□ -1.96
SDC1P18827 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.79□□□□□ -1.96
SDC1P18827 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.79□□□□□ -1.96
SDC1P18827 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.79□□□□□ -1.96
SDC1P18827 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.79□□□□□ -1.96
SDC1P18827 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.79□□□□□ -1.96
SDC1P18827 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.79□□□□□ -1.96
SDC1P18827 HIGD1AP11-201ENST00000438361 280 ntBASIC2.79□□□□□ -1.96
SDC1P18827 AC112653.1-201ENST00000443851 386 ntBASIC2.79□□□□□ -1.96
SDC1P18827 GAPDHP27-201ENST00000447427 1020 ntBASIC2.79□□□□□ -1.96
SDC1P18827 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.79□□□□□ -1.96
SDC1P18827 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.79□□□□□ -1.96
SDC1P18827 AC068724.1-201ENST00000487100 792 ntBASIC2.79□□□□□ -1.96
SDC1P18827 AC006483.1-201ENST00000487308 313 ntBASIC2.79□□□□□ -1.96
SDC1P18827 VN1R104P-201ENST00000505115 1009 ntBASIC2.79□□□□□ -1.96
SDC1P18827 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.79□□□□□ -1.96
SDC1P18827 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.79□□□□□ -1.96
SDC1P18827 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.79□□□□□ -1.96
SDC1P18827 AC087276.1-201ENST00000529659 480 ntBASIC2.79□□□□□ -1.96
SDC1P18827 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.79□□□□□ -1.96
SDC1P18827 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.79□□□□□ -1.96
SDC1P18827 AC090888.2-201ENST00000559765 1144 ntBASIC2.79□□□□□ -1.96
SDC1P18827 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.79□□□□□ -1.96
SDC1P18827 AC105224.1-201ENST00000587055 421 ntBASIC2.79□□□□□ -1.96
SDC1P18827 AC012119.1-201ENST00000603184 222 ntBASIC2.79□□□□□ -1.96
SDC1P18827 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.79□□□□□ -1.96
SDC1P18827 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms