Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 HPRT1P3-201ENST00000539521 576 ntBASIC2.65□□□□□ -1.99
NCK1P16333 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.65□□□□□ -1.99
NCK1P16333 AC009712.1-201ENST00000564938 316 ntBASIC2.65□□□□□ -1.99
NCK1P16333 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.65□□□□□ -1.99
NCK1P16333 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.65□□□□□ -1.99
NCK1P16333 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.65□□□□□ -1.99
NCK1P16333 AC010620.2-201ENST00000600135 313 ntBASIC2.65□□□□□ -1.99
NCK1P16333 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.65□□□□□ -1.99
NCK1P16333 BBIP1P1-201ENST00000602999 279 ntBASIC2.65□□□□□ -1.99
NCK1P16333 AC069431.2-201ENST00000604149 1099 ntBASIC2.65□□□□□ -1.99
NCK1P16333 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.65□□□□□ -1.99
NCK1P16333 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.65□□□□□ -1.99
NCK1P16333 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
NCK1P16333 AC099786.3-201ENST00000565735 1410 ntBASIC2.65□□□□□ -1.99
NCK1P16333 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.64□□□□□ -1.99
NCK1P16333 RNU6-223P-201ENST00000362830 107 ntBASIC2.64□□□□□ -1.99
NCK1P16333 SNORA71.1-201ENST00000364523 117 ntBASIC2.64□□□□□ -1.99
NCK1P16333 Y_RNA.548-201ENST00000384656 105 ntBASIC2.64□□□□□ -1.99
NCK1P16333 SNORA26.7-201ENST00000391288 122 ntBASIC2.64□□□□□ -1.99
NCK1P16333 MIR1284-201ENST00000408337 120 ntBASIC2.64□□□□□ -1.99
NCK1P16333 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.64□□□□□ -1.99
NCK1P16333 MTCYBP38-201ENST00000417160 1123 ntBASIC2.64□□□□□ -1.99
NCK1P16333 BNIP3P2-201ENST00000441221 577 ntBASIC2.64□□□□□ -1.99
NCK1P16333 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.64□□□□□ -1.99
NCK1P16333 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.64□□□□□ -1.99
NCK1P16333 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.64□□□□□ -1.99
NCK1P16333 CBWD4P-201ENST00000445695 655 ntBASIC2.64□□□□□ -1.99
NCK1P16333 snoU13.28-201ENST00000459235 104 ntBASIC2.64□□□□□ -1.99
NCK1P16333 RPS20P20-201ENST00000460498 340 ntBASIC2.64□□□□□ -1.99
NCK1P16333 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.64□□□□□ -1.99
NCK1P16333 AC009901.1-201ENST00000506703 541 ntBASIC2.64□□□□□ -1.99
NCK1P16333 AC091826.1-201ENST00000514065 313 ntBASIC2.64□□□□□ -1.99
NCK1P16333 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.64□□□□□ -1.99
NCK1P16333 RNY4P37-201ENST00000516225 96 ntBASIC2.64□□□□□ -1.99
NCK1P16333 HMGN1P28-201ENST00000521340 364 ntBASIC2.64□□□□□ -1.99
NCK1P16333 AC021451.1-201ENST00000523498 1129 ntBASIC2.64□□□□□ -1.99
NCK1P16333 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.64□□□□□ -1.99
NCK1P16333 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.64□□□□□ -1.99
NCK1P16333 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.64□□□□□ -1.99
NCK1P16333 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.64□□□□□ -1.99
NCK1P16333 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.64□□□□□ -1.99
NCK1P16333 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
NCK1P16333 SETP2-201ENST00000553886 926 ntBASIC2.64□□□□□ -1.99
NCK1P16333 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.64□□□□□ -1.99
NCK1P16333 TRAV28-201ENST00000557548 323 ntBASIC2.64□□□□□ -1.99
NCK1P16333 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.64□□□□□ -1.99
NCK1P16333 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.64□□□□□ -1.99
NCK1P16333 MIR3605-201ENST00000583214 100 ntBASIC2.64□□□□□ -1.99
NCK1P16333 ZNF861P-201ENST00000588126 639 ntBASIC2.64□□□□□ -1.99
NCK1P16333 AL359198.2-201ENST00000611836 194 ntBASIC2.64□□□□□ -1.99
NCK1P16333 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.64□□□□□ -1.99
NCK1P16333 AC008443.7-201ENST00000622195 246 ntBASIC2.64□□□□□ -1.99
NCK1P16333 U6.105-201ENST00000637379 88 ntBASIC2.64□□□□□ -1.99
NCK1P16333 AP003399.1-201ENST00000637534 361 ntBASIC2.64□□□□□ -1.99
NCK1P16333 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NCK1P16333 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
NCK1P16333 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NCK1P16333 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
NCK1P16333 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.63□□□□□ -1.99
NCK1P16333 MIR183-201ENST00000384958 110 ntBASIC2.63□□□□□ -1.99
NCK1P16333 RPL23AP29-201ENST00000397284 453 ntBASIC2.63□□□□□ -1.99
NCK1P16333 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NCK1P16333 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.63□□□□□ -1.99
NCK1P16333 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.63□□□□□ -1.99
NCK1P16333 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.63□□□□□ -1.99
NCK1P16333 AC008850.1-201ENST00000427546 362 ntBASIC2.63□□□□□ -1.99
NCK1P16333 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.63□□□□□ -1.99
NCK1P16333 RPL35AP22-201ENST00000436855 335 ntBASIC2.63□□□□□ -1.99
NCK1P16333 ARPC3P1-201ENST00000437218 533 ntBASIC2.63□□□□□ -1.99
NCK1P16333 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.63□□□□□ -1.99
NCK1P16333 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.63□□□□□ -1.99
NCK1P16333 Z82210.1-201ENST00000440037 231 ntBASIC2.63□□□□□ -1.99
NCK1P16333 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.63□□□□□ -1.99
NCK1P16333 snoU109.3-201ENST00000459477 145 ntBASIC2.63□□□□□ -1.99
NCK1P16333 AC087588.1-201ENST00000462203 316 ntBASIC2.63□□□□□ -1.99
NCK1P16333 RPL30P9-201ENST00000465586 330 ntBASIC2.63□□□□□ -1.99
NCK1P16333 RPS20P22-201ENST00000473700 357 ntBASIC2.63□□□□□ -1.99
NCK1P16333 RN7SL504P-201ENST00000494496 287 ntBASIC2.63□□□□□ -1.99
NCK1P16333 RAC1P5-201ENST00000512182 576 ntBASIC2.63□□□□□ -1.99
NCK1P16333 SCARNA13-201ENST00000516672 275 ntBASIC2.63□□□□□ -1.99
NCK1P16333 MTCO1P47-201ENST00000523889 1271 ntBASIC2.63□□□□□ -1.99
NCK1P16333 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.63□□□□□ -1.99
NCK1P16333 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.63□□□□□ -1.99
NCK1P16333 DUXAP3-201ENST00000603616 594 ntBASIC2.63□□□□□ -1.99
NCK1P16333 AC103710.4-201ENST00000609301 899 ntBASIC2.63□□□□□ -1.99
NCK1P16333 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.63□□□□□ -1.99
NCK1P16333 AL603758.1-201ENST00000618654 241 ntBASIC2.63□□□□□ -1.99
NCK1P16333 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.63□□□□□ -1.99
NCK1P16333 AC002064.3-201ENST00000623448 346 ntBASIC2.63□□□□□ -1.99
NCK1P16333 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.63□□□□□ -1.99
NCK1P16333 DDX10P1-201ENST00000448545 1933 ntBASIC2.63□□□□□ -1.99
NCK1P16333 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NCK1P16333 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.62□□□□□ -1.99
NCK1P16333 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.62□□□□□ -1.99
NCK1P16333 SNORA71.3-201ENST00000362582 128 ntBASIC2.62□□□□□ -1.99
NCK1P16333 RNU6-525P-201ENST00000363685 104 ntBASIC2.62□□□□□ -1.99
NCK1P16333 SNORA70.4-201ENST00000365509 134 ntBASIC2.62□□□□□ -1.99
NCK1P16333 RNU6-217P-201ENST00000384164 104 ntBASIC2.62□□□□□ -1.99
NCK1P16333 RNU6-1207P-201ENST00000384343 107 ntBASIC2.62□□□□□ -1.99
NCK1P16333 AL590084.2-201ENST00000401481 382 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms