Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CD44P16070 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CD44P16070 AP000547.3-204ENST00000588548 2523 ntBASIC6.85□□□□□ -1.31
CD44P16070 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CD44P16070 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.85□□□□□ -1.31
CD44P16070 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC6.85□□□□□ -1.31
CD44P16070 TLK1P1-201ENST00000456760 2440 ntBASIC6.85□□□□□ -1.31
CD44P16070 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CD44P16070 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.85□□□□□ -1.31
CD44P16070 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
CD44P16070 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CD44P16070 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.85□□□□□ -1.31
CD44P16070 Y_RNA.498-201ENST00000384460 102 ntBASIC6.85□□□□□ -1.31
CD44P16070 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CD44P16070 AL603914.1-201ENST00000401964 204 ntBASIC6.85□□□□□ -1.31
CD44P16070 AL627311.1-201ENST00000431514 115 ntBASIC6.85□□□□□ -1.31
CD44P16070 GEMIN2P1-201ENST00000454246 752 ntBASIC6.85□□□□□ -1.31
CD44P16070 AC018638.3-201ENST00000461273 132 ntBASIC6.85□□□□□ -1.31
CD44P16070 RN7SL39P-201ENST00000462264 297 ntBASIC6.85□□□□□ -1.31
CD44P16070 RN7SL326P-201ENST00000477493 296 ntBASIC6.85□□□□□ -1.31
CD44P16070 RPL23AP70-201ENST00000483361 460 ntBASIC6.85□□□□□ -1.31
CD44P16070 AC114324.2-202ENST00000503812 134 ntBASIC6.85□□□□□ -1.31
CD44P16070 RNU6-436P-201ENST00000516171 114 ntBASIC6.85□□□□□ -1.31
CD44P16070 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.85□□□□□ -1.31
CD44P16070 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CD44P16070 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
CD44P16070 POLR3GP1-201ENST00000594073 261 ntBASIC6.85□□□□□ -1.31
CD44P16070 RPL30P11-203ENST00000598995 310 ntBASIC6.85□□□□□ -1.31
CD44P16070 AC024581.2-201ENST00000619986 252 ntBASIC6.85□□□□□ -1.31
CD44P16070 AC211486.4-201ENST00000621495 113 ntBASIC6.85□□□□□ -1.31
CD44P16070 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.85□□□□□ -1.31
CD44P16070 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CD44P16070 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CD44P16070 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
CD44P16070 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.85□□□□□ -1.31
CD44P16070 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CD44P16070 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC6.85□□□□□ -1.31
CD44P16070 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CD44P16070 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CD44P16070 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CD44P16070 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CD44P16070 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
CD44P16070 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
CD44P16070 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.84□□□□□ -1.31
CD44P16070 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CD44P16070 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CD44P16070 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CD44P16070 STK31-205ENST00000433467 3085 ntTSL 2 BASIC6.84□□□□□ -1.31
CD44P16070 RNU6-1125P-201ENST00000363601 107 ntBASIC6.84□□□□□ -1.31
CD44P16070 RNA5SP125-201ENST00000364843 120 ntBASIC6.84□□□□□ -1.31
CD44P16070 RNA5SP77-201ENST00000365394 120 ntBASIC6.84□□□□□ -1.31
CD44P16070 RNU6-1014P-201ENST00000383940 103 ntBASIC6.84□□□□□ -1.31
CD44P16070 SNORD94-201ENST00000386037 137 ntBASIC6.84□□□□□ -1.31
CD44P16070 RPL23AP17-201ENST00000401064 499 ntBASIC6.84□□□□□ -1.31
CD44P16070 Y_RNA.593-201ENST00000410292 98 ntBASIC6.84□□□□□ -1.31
CD44P16070 YPEL5P1-201ENST00000419731 367 ntBASIC6.84□□□□□ -1.31
CD44P16070 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CD44P16070 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CD44P16070 AC021205.2-201ENST00000480069 347 ntBASIC6.84□□□□□ -1.31
CD44P16070 RPS4XP1-201ENST00000482189 787 ntBASIC6.84□□□□□ -1.31
CD44P16070 ATP5EP1-201ENST00000510257 156 ntBASIC6.84□□□□□ -1.31
CD44P16070 RNA5SP116-201ENST00000516132 98 ntBASIC6.84□□□□□ -1.31
CD44P16070 RNU6-109P-201ENST00000516364 107 ntBASIC6.84□□□□□ -1.31
CD44P16070 RNU6-184P-201ENST00000516514 107 ntBASIC6.84□□□□□ -1.31
CD44P16070 Y_RNA.710-201ENST00000516975 110 ntBASIC6.84□□□□□ -1.31
CD44P16070 RNU6-158P-201ENST00000517104 100 ntBASIC6.84□□□□□ -1.31
CD44P16070 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.84□□□□□ -1.31
CD44P16070 CYCSP23-201ENST00000519781 313 ntBASIC6.84□□□□□ -1.31
CD44P16070 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.84□□□□□ -1.31
CD44P16070 AL138963.2-201ENST00000605137 226 ntBASIC6.84□□□□□ -1.31
CD44P16070 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
CD44P16070 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
CD44P16070 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
CD44P16070 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.84□□□□□ -1.31
CD44P16070 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CD44P16070 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CD44P16070 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CD44P16070 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CD44P16070 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CD44P16070 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
CD44P16070 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC6.84□□□□□ -1.32
CD44P16070 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CD44P16070 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
CD44P16070 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CD44P16070 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CD44P16070 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.83□□□□□ -1.32
CD44P16070 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CD44P16070 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CD44P16070 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.83□□□□□ -1.32
CD44P16070 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.83□□□□□ -1.32
CD44P16070 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.83□□□□□ -1.32
CD44P16070 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CD44P16070 RNA5SP346-201ENST00000363541 121 ntBASIC6.83□□□□□ -1.32
CD44P16070 RNU6-1310P-201ENST00000384153 107 ntBASIC6.83□□□□□ -1.32
CD44P16070 SNORA29-201ENST00000384183 140 ntBASIC6.83□□□□□ -1.32
CD44P16070 CYB5AP4-201ENST00000396692 399 ntBASIC6.83□□□□□ -1.32
CD44P16070 AL391361.1-201ENST00000405580 489 ntBASIC6.83□□□□□ -1.32
CD44P16070 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.83□□□□□ -1.32
CD44P16070 AC094019.1-201ENST00000434678 472 ntBASIC6.83□□□□□ -1.32
CD44P16070 KNOP1P3-201ENST00000446933 426 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms