Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 BX890604.2-201ENST00000427883 474 ntBASIC3.79□□□□□ -1.8
MMP3P08254 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.79□□□□□ -1.8
MMP3P08254 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.79□□□□□ -1.8
MMP3P08254 RPL23AP33-201ENST00000442301 452 ntBASIC3.79□□□□□ -1.8
MMP3P08254 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.79□□□□□ -1.8
MMP3P08254 AL590399.6-201ENST00000446396 307 ntBASIC3.79□□□□□ -1.8
MMP3P08254 AL353691.1-201ENST00000451332 387 ntBASIC3.79□□□□□ -1.8
MMP3P08254 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.79□□□□□ -1.8
MMP3P08254 AP001486.1-201ENST00000463339 476 ntBASIC3.79□□□□□ -1.8
MMP3P08254 RPL9P33-201ENST00000484311 566 ntBASIC3.79□□□□□ -1.8
MMP3P08254 AC012170.1-201ENST00000495139 359 ntBASIC3.79□□□□□ -1.8
MMP3P08254 COX7A2P2-201ENST00000505291 250 ntBASIC3.79□□□□□ -1.8
MMP3P08254 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.79□□□□□ -1.8
MMP3P08254 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.79□□□□□ -1.8
MMP3P08254 AC006390.1-201ENST00000508068 283 ntBASIC3.79□□□□□ -1.8
MMP3P08254 AC026333.2-201ENST00000542164 106 ntBASIC3.79□□□□□ -1.8
MMP3P08254 AC123904.2-201ENST00000548059 300 ntBASIC3.79□□□□□ -1.8
MMP3P08254 AC009101.1-201ENST00000568135 242 ntBASIC3.79□□□□□ -1.8
MMP3P08254 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.79□□□□□ -1.8
MMP3P08254 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.79□□□□□ -1.8
MMP3P08254 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.79□□□□□ -1.8
MMP3P08254 AC090578.1-201ENST00000604955 591 ntBASIC3.79□□□□□ -1.8
MMP3P08254 HMGN2P28-201ENST00000606102 262 ntBASIC3.79□□□□□ -1.8
MMP3P08254 OR10AB1P-201ENST00000609613 938 ntBASIC3.79□□□□□ -1.8
MMP3P08254 AC105429.2-201ENST00000610567 517 ntBASIC3.79□□□□□ -1.8
MMP3P08254 AP001506.1-201ENST00000615444 211 ntBASIC3.79□□□□□ -1.8
MMP3P08254 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MMP3P08254 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
MMP3P08254 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.79□□□□□ -1.8
MMP3P08254 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
MMP3P08254 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MMP3P08254 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.79□□□□□ -1.8
MMP3P08254 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
MMP3P08254 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.79□□□□□ -1.8
MMP3P08254 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.79□□□□□ -1.8
MMP3P08254 AC073073.2-201ENST00000609827 2578 ntBASIC3.78□□□□□ -1.8
MMP3P08254 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
MMP3P08254 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
MMP3P08254 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
MMP3P08254 RNU6-283P-201ENST00000364788 107 ntBASIC3.78□□□□□ -1.8
MMP3P08254 SNORA48.5-201ENST00000391143 135 ntBASIC3.78□□□□□ -1.8
MMP3P08254 FCF1P10-201ENST00000407590 479 ntBASIC3.78□□□□□ -1.8
MMP3P08254 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.78□□□□□ -1.8
MMP3P08254 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.78□□□□□ -1.8
MMP3P08254 UBE2V1P10-201ENST00000414685 269 ntBASIC3.78□□□□□ -1.8
MMP3P08254 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.78□□□□□ -1.8
MMP3P08254 BX295541.1-201ENST00000417774 250 ntBASIC3.78□□□□□ -1.8
MMP3P08254 C1DP2-201ENST00000418167 426 ntBASIC3.78□□□□□ -1.8
MMP3P08254 USP9YP36-201ENST00000424581 829 ntBASIC3.78□□□□□ -1.8
MMP3P08254 ISCA1P6-201ENST00000427740 390 ntBASIC3.78□□□□□ -1.8
MMP3P08254 RPL17P49-201ENST00000443728 411 ntBASIC3.78□□□□□ -1.8
MMP3P08254 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.78□□□□□ -1.8
MMP3P08254 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.78□□□□□ -1.8
MMP3P08254 GAPDHP17-201ENST00000449858 1001 ntBASIC3.78□□□□□ -1.8
MMP3P08254 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.78□□□□□ -1.8
MMP3P08254 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.78□□□□□ -1.8
MMP3P08254 AC068305.1-201ENST00000497406 726 ntBASIC3.78□□□□□ -1.8
MMP3P08254 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.78□□□□□ -1.8
MMP3P08254 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.78□□□□□ -1.8
MMP3P08254 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.78□□□□□ -1.8
MMP3P08254 AF213884.2-201ENST00000510417 903 ntBASIC3.78□□□□□ -1.8
MMP3P08254 TMEM248P1-201ENST00000510579 951 ntBASIC3.78□□□□□ -1.8
MMP3P08254 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
MMP3P08254 RNU6-430P-201ENST00000517078 107 ntBASIC3.78□□□□□ -1.8
MMP3P08254 IGKV2D-23-201ENST00000518179 286 ntBASIC3.78□□□□□ -1.8
MMP3P08254 AP003467.2-201ENST00000520175 319 ntBASIC3.78□□□□□ -1.8
MMP3P08254 AC022616.6-201ENST00000520479 119 ntBASIC3.78□□□□□ -1.8
MMP3P08254 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.78□□□□□ -1.8
MMP3P08254 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.78□□□□□ -1.8
MMP3P08254 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.78□□□□□ -1.8
MMP3P08254 AC005476.1-201ENST00000554427 397 ntBASIC3.78□□□□□ -1.8
MMP3P08254 AC107954.1-201ENST00000565906 727 ntBASIC3.78□□□□□ -1.8
MMP3P08254 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.78□□□□□ -1.8
MMP3P08254 MIR5004-201ENST00000579078 107 ntBASIC3.78□□□□□ -1.8
MMP3P08254 MIR4644-201ENST00000579929 84 ntBASIC3.78□□□□□ -1.8
MMP3P08254 AL161729.4-201ENST00000604650 476 ntBASIC3.78□□□□□ -1.8
MMP3P08254 AC010680.4-201ENST00000605334 543 ntBASIC3.78□□□□□ -1.8
MMP3P08254 MIR486-1-201ENST00000612171 68 ntBASIC3.78□□□□□ -1.8
MMP3P08254 AL590099.1-201ENST00000615276 138 ntBASIC3.78□□□□□ -1.8
MMP3P08254 AC108479.2-201ENST00000617314 601 ntBASIC3.78□□□□□ -1.8
MMP3P08254 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.78□□□□□ -1.8
MMP3P08254 NCAPGP1-201ENST00000505112 1814 ntBASIC3.78□□□□□ -1.8
MMP3P08254 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.78□□□□□ -1.8
MMP3P08254 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
MMP3P08254 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
MMP3P08254 AC018555.1-201ENST00000567548 1980 ntBASIC3.78□□□□□ -1.8
MMP3P08254 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
MMP3P08254 AC068647.1-201ENST00000489539 2265 ntBASIC3.77□□□□□ -1.81
MMP3P08254 MTND5P26-201ENST00000426018 1752 ntBASIC3.77□□□□□ -1.81
MMP3P08254 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
MMP3P08254 U8.3-201ENST00000363321 132 ntBASIC3.77□□□□□ -1.81
MMP3P08254 RN7SKP226-201ENST00000364912 300 ntBASIC3.77□□□□□ -1.81
MMP3P08254 RNA5SP56-201ENST00000410277 118 ntBASIC3.77□□□□□ -1.81
MMP3P08254 RNU2-47P-201ENST00000410649 186 ntBASIC3.77□□□□□ -1.81
MMP3P08254 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.77□□□□□ -1.81
MMP3P08254 AC063979.1-201ENST00000415539 377 ntBASIC3.77□□□□□ -1.81
MMP3P08254 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.77□□□□□ -1.81
MMP3P08254 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.77□□□□□ -1.81
MMP3P08254 AL589872.1-201ENST00000426602 288 ntBASIC3.77□□□□□ -1.81
MMP3P08254 AL358934.1-201ENST00000432346 324 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms