Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 MORF4L1P7-201ENST00000426038 703 ntBASIC1.63□□□□□ -2.15
SNRNP200O75643 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.63□□□□□ -2.15
SNRNP200O75643 AC009296.1-201ENST00000443146 155 ntBASIC1.63□□□□□ -2.15
SNRNP200O75643 HMGB1P48-201ENST00000446155 598 ntBASIC1.63□□□□□ -2.15
SNRNP200O75643 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC1.63□□□□□ -2.15
SNRNP200O75643 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.63□□□□□ -2.15
SNRNP200O75643 snoU13.23-201ENST00000458863 104 ntBASIC1.63□□□□□ -2.15
SNRNP200O75643 RN7SKP210-201ENST00000459176 261 ntBASIC1.63□□□□□ -2.15
SNRNP200O75643 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.63□□□□□ -2.15
SNRNP200O75643 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.63□□□□□ -2.15
SNRNP200O75643 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.63□□□□□ -2.15
SNRNP200O75643 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.63□□□□□ -2.15
SNRNP200O75643 OR5BM1P-201ENST00000512021 366 ntBASIC1.63□□□□□ -2.15
SNRNP200O75643 RNU1-104P-201ENST00000517280 175 ntBASIC1.63□□□□□ -2.15
SNRNP200O75643 AC007115.1-201ENST00000546853 234 ntBASIC1.63□□□□□ -2.15
SNRNP200O75643 AC023824.2-201ENST00000566185 400 ntBASIC1.63□□□□□ -2.15
SNRNP200O75643 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.63□□□□□ -2.15
SNRNP200O75643 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.63□□□□□ -2.15
SNRNP200O75643 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.62□□□□□ -2.15
SNRNP200O75643 RNU6-1159P-201ENST00000362933 107 ntBASIC1.62□□□□□ -2.15
SNRNP200O75643 SNORA67.1-201ENST00000364749 141 ntBASIC1.62□□□□□ -2.15
SNRNP200O75643 RNU4-52P-201ENST00000384209 138 ntBASIC1.62□□□□□ -2.15
SNRNP200O75643 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.62□□□□□ -2.15
SNRNP200O75643 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.62□□□□□ -2.15
SNRNP200O75643 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.62□□□□□ -2.15
SNRNP200O75643 TPT1P14-201ENST00000448018 505 ntBASIC1.62□□□□□ -2.15
SNRNP200O75643 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.62□□□□□ -2.15
SNRNP200O75643 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.62□□□□□ -2.15
SNRNP200O75643 AC008562.1-201ENST00000521763 330 ntBASIC1.62□□□□□ -2.15
SNRNP200O75643 COX6CP5-201ENST00000527162 228 ntBASIC1.62□□□□□ -2.15
SNRNP200O75643 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.62□□□□□ -2.15
SNRNP200O75643 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC1.62□□□□□ -2.15
SNRNP200O75643 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
SNRNP200O75643 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SNRNP200O75643 SDAD1P2-201ENST00000441308 2028 ntBASIC1.62□□□□□ -2.15
SNRNP200O75643 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SNRNP200O75643 HSPE1P11-201ENST00000339579 310 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SNRNP200O75643 AL357078.2-201ENST00000416486 427 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 AC099677.1-201ENST00000420575 175 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 AL358453.1-201ENST00000422522 250 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 RPL7P37-201ENST00000425095 738 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 RABEPKP1-201ENST00000440529 1026 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 PGBD4P3-201ENST00000440731 581 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 AC009237.8-201ENST00000445492 379 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 AL627224.1-201ENST00000448334 444 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 AL034418.1-201ENST00000448675 860 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.61□□□□□ -2.15
SNRNP200O75643 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.61□□□□□ -2.15
SNRNP200O75643 AC087879.1-201ENST00000474343 374 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.61□□□□□ -2.15
SNRNP200O75643 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.61□□□□□ -2.15
SNRNP200O75643 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.61□□□□□ -2.15
SNRNP200O75643 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.61□□□□□ -2.15
SNRNP200O75643 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.61□□□□□ -2.15
SNRNP200O75643 AP001804.3-201ENST00000525146 880 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.61□□□□□ -2.15
SNRNP200O75643 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.61□□□□□ -2.15
SNRNP200O75643 AC011611.5-201ENST00000552477 578 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.61□□□□□ -2.15
SNRNP200O75643 SUB1P3-201ENST00000564581 315 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.61□□□□□ -2.15
SNRNP200O75643 PISRT1-201ENST00000626175 531 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SNRNP200O75643 SNORA26.9-201ENST00000391322 122 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 AC073264.1-201ENST00000411508 416 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 MTND1P23-201ENST00000416931 372 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 MTCO3P4-201ENST00000419236 787 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 TMEM167AP1-201ENST00000423409 219 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.61□□□□□ -2.15
SNRNP200O75643 AC078857.1-201ENST00000469870 667 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SNRNP200O75643 AC025768.1-201ENST00000510057 267 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.61□□□□□ -2.15
SNRNP200O75643 RNU6-1004P-201ENST00000516584 111 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.61□□□□□ -2.15
SNRNP200O75643 SUB1P1-201ENST00000524415 382 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 AC010928.2-201ENST00000588017 287 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 MIR6895-201ENST00000613497 78 ntBASIC1.61□□□□□ -2.15
SNRNP200O75643 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.61□□□□□ -2.15
SNRNP200O75643 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.61□□□□□ -2.15
SNRNP200O75643 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.61□□□□□ -2.15
SNRNP200O75643 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
SNRNP200O75643 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SNRNP200O75643 Y_RNA.140-201ENST00000363474 103 ntBASIC1.6□□□□□ -2.15
SNRNP200O75643 RNU4-13P-201ENST00000364019 141 ntBASIC1.6□□□□□ -2.15
SNRNP200O75643 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SNRNP200O75643 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SNRNP200O75643 RNU6-1140P-201ENST00000410517 106 ntBASIC1.6□□□□□ -2.15
SNRNP200O75643 IPO7P1-201ENST00000442031 636 ntBASIC1.6□□□□□ -2.15
SNRNP200O75643 AC079203.1-201ENST00000487972 404 ntBASIC1.6□□□□□ -2.15
SNRNP200O75643 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.6□□□□□ -2.15
SNRNP200O75643 AC087272.1-201ENST00000523624 533 ntBASIC1.6□□□□□ -2.15
SNRNP200O75643 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.6□□□□□ -2.15
SNRNP200O75643 AC009127.3-201ENST00000570531 403 ntBASIC1.6□□□□□ -2.15
SNRNP200O75643 AC024614.2-201ENST00000577584 372 ntBASIC1.6□□□□□ -2.15
SNRNP200O75643 HMGB1P51-201ENST00000605166 638 ntBASIC1.6□□□□□ -2.15
SNRNP200O75643 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.6□□□□□ -2.15
SNRNP200O75643 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.6□□□□□ -2.15
SNRNP200O75643 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms