Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 RNA5SP306-201ENST00000411087 107 ntBASIC5.08□□□□□ -1.6
VAMP4O75379 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC5.08□□□□□ -1.6
VAMP4O75379 CYCSP10-201ENST00000417973 294 ntBASIC5.08□□□□□ -1.6
VAMP4O75379 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.08□□□□□ -1.6
VAMP4O75379 AC005534.2-201ENST00000431047 433 ntBASIC5.08□□□□□ -1.6
VAMP4O75379 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.08□□□□□ -1.6
VAMP4O75379 NDUFS5P3-201ENST00000450668 321 ntBASIC5.08□□□□□ -1.6
VAMP4O75379 AC108059.3-201ENST00000456388 214 ntBASIC5.08□□□□□ -1.6
VAMP4O75379 AL049714.1-201ENST00000466686 347 ntBASIC5.08□□□□□ -1.6
VAMP4O75379 COX7A2P2-201ENST00000505291 250 ntBASIC5.08□□□□□ -1.6
VAMP4O75379 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.08□□□□□ -1.6
VAMP4O75379 AC011979.2-201ENST00000527568 352 ntBASIC5.08□□□□□ -1.6
VAMP4O75379 TOMM20P2-201ENST00000540082 421 ntBASIC5.08□□□□□ -1.6
VAMP4O75379 AC093027.1-201ENST00000546698 429 ntBASIC5.08□□□□□ -1.6
VAMP4O75379 BNIP3P6-201ENST00000549284 499 ntBASIC5.08□□□□□ -1.6
VAMP4O75379 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.08□□□□□ -1.6
VAMP4O75379 RPL21P12-201ENST00000559810 515 ntBASIC5.08□□□□□ -1.6
VAMP4O75379 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.08□□□□□ -1.6
VAMP4O75379 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.08□□□□□ -1.6
VAMP4O75379 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.08□□□□□ -1.6
VAMP4O75379 AC243960.4-201ENST00000600532 288 ntBASIC5.08□□□□□ -1.6
VAMP4O75379 YWHAQP7-201ENST00000603536 658 ntBASIC5.08□□□□□ -1.6
VAMP4O75379 uc_338.5-201ENST00000611839 155 ntBASIC5.08□□□□□ -1.6
VAMP4O75379 AC009248.2-201ENST00000619826 254 ntBASIC5.08□□□□□ -1.6
VAMP4O75379 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.08□□□□□ -1.6
VAMP4O75379 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
VAMP4O75379 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
VAMP4O75379 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VAMP4O75379 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
VAMP4O75379 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
VAMP4O75379 Z82217.1-201ENST00000625157 8149 ntBASIC5.07□□□□□ -1.6
VAMP4O75379 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VAMP4O75379 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VAMP4O75379 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
VAMP4O75379 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
VAMP4O75379 U3.11-201ENST00000364476 212 ntBASIC5.07□□□□□ -1.6
VAMP4O75379 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
VAMP4O75379 AL160275.2-201ENST00000412010 394 ntBASIC5.07□□□□□ -1.6
VAMP4O75379 MTND3P8-201ENST00000412909 339 ntBASIC5.07□□□□□ -1.6
VAMP4O75379 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.07□□□□□ -1.6
VAMP4O75379 IFNA20P-201ENST00000436840 528 ntBASIC5.07□□□□□ -1.6
VAMP4O75379 AC073415.1-201ENST00000449240 153 ntBASIC5.07□□□□□ -1.6
VAMP4O75379 RPS4XP10-201ENST00000465034 731 ntBASIC5.07□□□□□ -1.6
VAMP4O75379 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.07□□□□□ -1.6
VAMP4O75379 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.07□□□□□ -1.6
VAMP4O75379 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VAMP4O75379 AC114797.1-201ENST00000514003 728 ntBASIC5.07□□□□□ -1.6
VAMP4O75379 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.07□□□□□ -1.6
VAMP4O75379 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.07□□□□□ -1.6
VAMP4O75379 HPRT1P3-201ENST00000539521 576 ntBASIC5.07□□□□□ -1.6
VAMP4O75379 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.07□□□□□ -1.6
VAMP4O75379 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC5.07□□□□□ -1.6
VAMP4O75379 MTCO3P13-201ENST00000577757 781 ntBASIC5.07□□□□□ -1.6
VAMP4O75379 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.07□□□□□ -1.6
VAMP4O75379 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.07□□□□□ -1.6
VAMP4O75379 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.07□□□□□ -1.6
VAMP4O75379 AC103710.2-201ENST00000609912 942 ntBASIC5.07□□□□□ -1.6
VAMP4O75379 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.07□□□□□ -1.6
VAMP4O75379 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.07□□□□□ -1.6
VAMP4O75379 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.07□□□□□ -1.6
VAMP4O75379 AC090229.1-201ENST00000590983 1609 ntBASIC5.07□□□□□ -1.6
VAMP4O75379 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.07□□□□□ -1.6
VAMP4O75379 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.07□□□□□ -1.6
VAMP4O75379 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VAMP4O75379 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
VAMP4O75379 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
VAMP4O75379 MTND4P35-201ENST00000604257 1375 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.06□□□□□ -1.6
VAMP4O75379 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VAMP4O75379 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VAMP4O75379 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VAMP4O75379 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VAMP4O75379 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
VAMP4O75379 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.06□□□□□ -1.6
VAMP4O75379 Y_RNA.431-201ENST00000384086 102 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 MIR1251-201ENST00000408552 70 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 RN7SKP140-201ENST00000411196 284 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 HMGN1P24-201ENST00000412282 298 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.06□□□□□ -1.6
VAMP4O75379 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.06□□□□□ -1.6
VAMP4O75379 AL353678.1-201ENST00000422735 741 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.06□□□□□ -1.6
VAMP4O75379 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.06□□□□□ -1.6
VAMP4O75379 OR4F13P-201ENST00000428478 931 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.06□□□□□ -1.6
VAMP4O75379 KCTD9P3-201ENST00000434597 1169 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.06□□□□□ -1.6
VAMP4O75379 FTH1P1-201ENST00000437933 532 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 HMGB1P37-201ENST00000439613 609 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 RPL7AP28-201ENST00000464513 571 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
VAMP4O75379 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.06□□□□□ -1.6
VAMP4O75379 AL139099.1-201ENST00000497398 403 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 RNU6-277P-201ENST00000516272 106 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 RNU6-352P-201ENST00000516908 107 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC5.06□□□□□ -1.6
VAMP4O75379 PSMA2P1-201ENST00000526365 646 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.06□□□□□ -1.6
VAMP4O75379 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.06□□□□□ -1.6
VAMP4O75379 AC053481.4-201ENST00000583164 216 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms