Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.44□□□□□ -2.02
CHD1O14646 MIR3660-201ENST00000584845 100 ntBASIC2.44□□□□□ -2.02
CHD1O14646 AL391646.1-201ENST00000603860 190 ntBASIC2.44□□□□□ -2.02
CHD1O14646 AL157700.1-201ENST00000561973 1432 ntBASIC2.43□□□□□ -2.02
CHD1O14646 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CHD1O14646 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CHD1O14646 AC109780.2-201ENST00000413467 845 ntBASIC2.43□□□□□ -2.02
CHD1O14646 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.43□□□□□ -2.02
CHD1O14646 snoU109.4-201ENST00000458953 143 ntBASIC2.43□□□□□ -2.02
CHD1O14646 AC090515.1-201ENST00000465295 476 ntBASIC2.43□□□□□ -2.02
CHD1O14646 RPL37P25-201ENST00000507308 276 ntBASIC2.43□□□□□ -2.02
CHD1O14646 AL360085.1-201ENST00000604713 532 ntBASIC2.43□□□□□ -2.02
CHD1O14646 AP000553.5-201ENST00000641933 54 ntBASIC2.43□□□□□ -2.02
CHD1O14646 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CHD1O14646 AC005336.3-201ENST00000623833 2679 ntBASIC2.43□□□□□ -2.02
CHD1O14646 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.43□□□□□ -2.02
CHD1O14646 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
CHD1O14646 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
CHD1O14646 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CHD1O14646 AC114973.1-201ENST00000429057 632 ntBASIC2.42□□□□□ -2.02
CHD1O14646 CALM1P1-201ENST00000442082 433 ntBASIC2.42□□□□□ -2.02
CHD1O14646 SNORA31.11-201ENST00000516528 139 ntBASIC2.42□□□□□ -2.02
CHD1O14646 MIR3618-201ENST00000580330 88 ntBASIC2.42□□□□□ -2.02
CHD1O14646 BNIP3P4-201ENST00000604946 565 ntBASIC2.42□□□□□ -2.02
CHD1O14646 HSPE1P14-201ENST00000605812 302 ntBASIC2.42□□□□□ -2.02
CHD1O14646 AC121761.2-201ENST00000617300 689 ntBASIC2.42□□□□□ -2.02
CHD1O14646 AC098679.5-201ENST00000624394 571 ntBASIC2.42□□□□□ -2.02
CHD1O14646 DDX10P1-201ENST00000448545 1933 ntBASIC2.42□□□□□ -2.02
CHD1O14646 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
CHD1O14646 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
CHD1O14646 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CHD1O14646 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CHD1O14646 RNU6-1032P-201ENST00000384100 107 ntBASIC2.42□□□□□ -2.02
CHD1O14646 NAP1L4P3-201ENST00000432820 1147 ntBASIC2.42□□□□□ -2.02
CHD1O14646 AC010625.1-201ENST00000511296 403 ntBASIC2.42□□□□□ -2.02
CHD1O14646 AC019176.1-201ENST00000518519 225 ntBASIC2.42□□□□□ -2.02
CHD1O14646 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.42□□□□□ -2.02
CHD1O14646 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.42□□□□□ -2.02
CHD1O14646 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.42□□□□□ -2.02
CHD1O14646 AC005730.3-201ENST00000583067 366 ntBASIC2.42□□□□□ -2.02
CHD1O14646 AC011712.1-201ENST00000588959 234 ntBASIC2.42□□□□□ -2.02
CHD1O14646 uc_338.12-201ENST00000616344 181 ntBASIC2.42□□□□□ -2.02
CHD1O14646 AC008121.3-201ENST00000618726 433 ntBASIC2.42□□□□□ -2.02
CHD1O14646 AP002907.1-201ENST00000606361 1430 ntBASIC2.41□□□□□ -2.02
CHD1O14646 RNU6-1080P-201ENST00000383982 107 ntBASIC2.41□□□□□ -2.02
CHD1O14646 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.41□□□□□ -2.02
CHD1O14646 HMGN2P21-201ENST00000447764 270 ntBASIC2.41□□□□□ -2.02
CHD1O14646 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.41□□□□□ -2.02
CHD1O14646 AC139103.1-201ENST00000534696 1030 ntBASIC2.41□□□□□ -2.02
CHD1O14646 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.41□□□□□ -2.02
CHD1O14646 AC068714.1-201ENST00000559623 800 ntBASIC2.41□□□□□ -2.02
CHD1O14646 AC109446.2-201ENST00000567872 497 ntBASIC2.41□□□□□ -2.02
CHD1O14646 MTCO1P6-201ENST00000481192 1384 ntBASIC2.41□□□□□ -2.02
CHD1O14646 U8.1-201ENST00000362843 134 ntBASIC2.4□□□□□ -2.02
CHD1O14646 TPMTP3-201ENST00000411928 735 ntBASIC2.4□□□□□ -2.02
CHD1O14646 SEM1P1-201ENST00000506694 209 ntBASIC2.4□□□□□ -2.02
CHD1O14646 RPL21P5-201ENST00000554662 472 ntBASIC2.4□□□□□ -2.02
CHD1O14646 MIR4448-201ENST00000584360 86 ntBASIC2.4□□□□□ -2.02
CHD1O14646 AL592494.3-201ENST00000609485 464 ntBASIC2.4□□□□□ -2.02
CHD1O14646 AC092159.4-201ENST00000624944 550 ntBASIC2.4□□□□□ -2.02
CHD1O14646 MKKS-204ENST00000639674 192 ntBASIC2.4□□□□□ -2.02
CHD1O14646 MIR92A2-201ENST00000385299 75 ntBASIC2.39□□□□□ -2.03
CHD1O14646 RNA5SP105-201ENST00000391123 113 ntBASIC2.39□□□□□ -2.03
CHD1O14646 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.39□□□□□ -2.03
CHD1O14646 CCNB2P1-201ENST00000399411 1150 ntBASIC2.39□□□□□ -2.03
CHD1O14646 BX682237.1-201ENST00000415016 335 ntBASIC2.39□□□□□ -2.03
CHD1O14646 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.39□□□□□ -2.03
CHD1O14646 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.39□□□□□ -2.03
CHD1O14646 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.39□□□□□ -2.03
CHD1O14646 SSXP4-201ENST00000451349 245 ntBASIC2.39□□□□□ -2.03
CHD1O14646 HMGB1P26-201ENST00000452520 628 ntBASIC2.39□□□□□ -2.03
CHD1O14646 AC093767.1-201ENST00000504523 156 ntBASIC2.39□□□□□ -2.03
CHD1O14646 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CHD1O14646 AL359273.1-201ENST00000510918 627 ntBASIC2.39□□□□□ -2.03
CHD1O14646 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.39□□□□□ -2.03
CHD1O14646 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.39□□□□□ -2.03
CHD1O14646 MAPK10-266ENST00000641066 6555 ntBASIC2.39□□□□□ -2.03
CHD1O14646 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CHD1O14646 SNORD48-201ENST00000364953 64 ntBASIC2.39□□□□□ -2.03
CHD1O14646 RNU6-225P-201ENST00000384613 103 ntBASIC2.39□□□□□ -2.03
CHD1O14646 SNRPEP2-201ENST00000397592 279 ntBASIC2.39□□□□□ -2.03
CHD1O14646 TRGV6-201ENST00000417928 299 ntBASIC2.39□□□□□ -2.03
CHD1O14646 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.39□□□□□ -2.03
CHD1O14646 RPS6P15-201ENST00000431996 751 ntBASIC2.39□□□□□ -2.03
CHD1O14646 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.39□□□□□ -2.03
CHD1O14646 FAM106DP-201ENST00000586416 501 ntBASIC2.39□□□□□ -2.03
CHD1O14646 SNHG22-203ENST00000617833 660 ntBASIC2.39□□□□□ -2.03
CHD1O14646 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.39□□□□□ -2.03
CHD1O14646 AL136520.1-201ENST00000600311 1322 ntBASIC2.38□□□□□ -2.03
CHD1O14646 NUP58P1-201ENST00000502546 1738 ntBASIC2.38□□□□□ -2.03
CHD1O14646 RPL17P49-201ENST00000443728 411 ntBASIC2.38□□□□□ -2.03
CHD1O14646 HMGN2P18-201ENST00000450680 270 ntBASIC2.38□□□□□ -2.03
CHD1O14646 RPS29P29-201ENST00000456396 171 ntBASIC2.38□□□□□ -2.03
CHD1O14646 AC096992.1-201ENST00000459808 709 ntBASIC2.38□□□□□ -2.03
CHD1O14646 HMGN2P13-201ENST00000476476 274 ntBASIC2.38□□□□□ -2.03
CHD1O14646 AC023050.1-201ENST00000498198 304 ntBASIC2.38□□□□□ -2.03
CHD1O14646 RNU6-347P-201ENST00000516658 105 ntBASIC2.38□□□□□ -2.03
CHD1O14646 AF279873.1-201ENST00000523393 313 ntBASIC2.38□□□□□ -2.03
CHD1O14646 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.38□□□□□ -2.03
CHD1O14646 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms